D. rerio Gene: twf1b - ENSDARG00000011661 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011661
Nametwf1b
Descriptiontwinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92472

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.83548
  • 94.83548
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
  • 8.19e3
85.68912
  • 85.68912
  • 72.31170
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
5.09e3
  • 5.09e3
  • 5.09e3
  • 6.59e3
  • 7.66e3
  • 7.70e3
82.80331
  • 82.80331
  • 82.80128
  • 77.72508
  • 74.13009
  • 73.99152
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
6.28e3
  • 6.28e3
  • 7.40e3
  • 8.07e3
78.77733
  • 78.77733
  • 74.99660
  • 72.72050
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.29e3
  • 6.29e3
78.75095
  • 78.75095
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.72206
  • 78.72206
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.40e3
  • 6.40e3
78.37632
  • 78.37632
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.50e3
  • 6.50e3
78.03052
  • 78.03052
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.53952
  • 75.53952
AEIR
  • AEIR
UBERON:0001787photoreceptor layer of retina
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
7.40e3
  • 7.40e3
  • 7.40e3
74.99660
  • 74.99660
  • 74.99491
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.13685
  • 74.13685
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
73.87685
  • 73.87685
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
72.96064
  • 72.96064
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.68e3
  • 8.68e3
70.65892
  • 70.65892
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
8.88e3
  • 8.88e3
69.99324
  • 69.99324
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.88e3
  • 8.88e3
  • 9.25e3
  • 9.35e3
  • 9.87e3
  • 9.87e3
  • 1.20e4
  • 1.23e4
69.98817
  • 69.98817
  • 68.73648
  • 68.40414
  • 66.65314
  • 66.64638
  • 59.35640
  • 58.31136
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
69.96993
  • 69.96993
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.14e3
  • 9.14e3
69.10277
  • 69.10277
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.20e3
  • 9.20e3
68.90136
  • 68.90136
AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.87e3
  • 9.87e3
  • 1.06e4
  • 1.16e4
  • 1.16e4
66.65652
  • 66.65652
  • 64.27218
  • 60.69907
  • 60.69907
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.02e4
  • 1.02e4
  • 1.06e4
65.60979
  • 65.60979
  • 64.27218
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
64.78799
  • 64.78799
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.48e4
55.16372
  • 55.16372
  • 49.93916
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
49.92902
  • 49.92902
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC074070, BC164001, CR786571
EnsemblENSDARG00000011661 (twf1b)
Uniprot/SPTREMBLQ6DKF4, Q6DKF4_DANRE
ZFINZDB-GENE-040711-3 (twf1b)

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