D. rerio Gene: prtfdc1 - ENSDARG00000011683 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011683
Nameprtfdc1
Descriptionphosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
OrganismDanio rerio (zebrafish)
Synonym(s)hprt, hprt1, hprt1l, zgc:55561, zgc:86771

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
744
  • 744
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
3.35e3
  • 3.35e3
  • 4.25e3
  • 5.76e3
  • 1.04e4
  • 1.05e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.34e3
  • 6.34e3
  • 6.34e3
  • 6.34e3
  • 6.58e3
  • 6.83e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.89e3
  • 8.46e3
  • 8.46e3
  • 8.63e3
  • 8.71e3
  • 8.71e3
  • 8.88e3
  • 8.88e3
  • 9.05e3
  • 9.05e3
  • 9.05e3
  • 9.62e3
  • 9.87e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.21e3
  • 7.21e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.18e3
  • 9.18e3
  • 1.31e4
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC071440, CU914162
EnsemblENSDARG00000011683 (prtfdc1)
Uniprot/SPTREMBLQ6IQG6, Q6IQG6_DANRE
ZFINZDB-GENE-980526-324 (prtfdc1)

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