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D. rerio Gene: ctsll - ENSDARG00000011701 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011701
Namectsll
Descriptioncathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101557
Orthologs(s)38 orthologs
Paralog(s)24 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
237
  • 237
  • 296
  • 531
  • 613
  • 616
  • 1.46e3
99.21
  • 99.21
  • 99.01
  • 98.23
  • 97.95
  • 97.94
  • 95.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
601
  • 601
  • 647
  • 662
  • 688
  • 1.07e3
  • 2.93e3
  • 4.75e3
  • 6.19e3
  • 1.24e4
  • 1.31e4
  • 1.49e4
  • 1.83e4
  • 1.83e4
97.99
  • 97.99
  • 97.84
  • 97.79
  • 97.70
  • 96.42
  • 90.19
  • 84.09
  • 79.29
  • 58.57
  • 56.27
  • 49.95
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
696
  • 696
  • 895
  • 930
  • 1.56e3
  • 1.72e3
  • 1.82e3
  • 2.22e3
  • 1.11e4
  • 1.66e4
  • 2.19e4
97.67
  • 97.67
  • 97.01
  • 96.89
  • 94.77
  • 94.24
  • 93.89
  • 92.57
  • 62.81
  • 44.28
  • 26.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.37e3
  • 1.37e3
  • 4.52e3
95.42
  • 95.42
  • 84.85
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.18e3
  • 9.18e3
  • 1.91e4
69.28
  • 69.28
  • 35.97
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.16e4
  • 1.16e4
  • 1.22e4
61.06
  • 61.06
  • 59.02
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.84
  • 52.84
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.44e4
  • 1.44e4
51.83
  • 51.83
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.22
  • 50.22
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.51e4
  • 1.51e4
49.60
  • 49.60
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.51e4
  • 1.51e4
  • 1.93e4
49.53
  • 49.53
  • 35.44
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.16
  • 47.16
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.29
  • 45.29
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.54
  • 38.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.48
  • 38.48
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.41
  • 34.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.24
  • 30.24
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.08
  • 29.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.45
  • 25.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species37 genesCompare expression
Bilateria17 species38 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011701.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Vertebrata13 genesCompare expression
Deuterostomia14 genesCompare expression
Bilateria16 genesCompare expression
Opisthokonta18 genesCompare expression
Eukaryota24 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000011701.

Cross-references

EnsemblENSDARG00000011701 (ctsll)
ZFINZDB-GENE-041010-76 (ctsll)
EMBLBX119902
Uniprot/SPTREMBLA2BEM8, A2BEM8_DANRE

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