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D. rerio Gene: marveld1 - ENSDARG00000011724 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011724
Namemarveld1
DescriptionMARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7136220
Orthologs(s)11 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:2000001Kupffer's vesicle
  • ZFS:0000026Segmentation:14-19 somites
1.87e3
  • 1.87e3
93.75
  • 93.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.79
  • 86.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.45
  • 86.45
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
  • 9.09e3
82.47
  • 82.47
  • 69.58
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.87e3
  • 6.87e3
  • 8.08e3
  • 9.24e3
  • 1.03e4
  • 1.58e4
76.98
  • 76.98
  • 72.96
  • 69.08
  • 65.42
  • 47.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.89e3
  • 6.89e3
  • 8.54e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
76.92
  • 76.92
  • 71.42
  • 71.41
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.46e3
  • 7.46e3
  • 9.71e3
75.01
  • 75.01
  • 67.49
AEIR
  • AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000026Segmentation:14-19 somites
7.47e3
  • 7.47e3
74.99
  • 74.99
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
74.15
  • 74.15
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
73.97
  • 73.97
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.08
  • 70.08
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000026Segmentation:14-19 somites
8.96e3
  • 8.96e3
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
69.36
  • 69.36
AEIR
  • AEIR
UBERON:0003089sclerotome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.09e4
  • 1.15e4
64.99
  • 64.99
  • 63.63
  • 61.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000026Segmentation:14-19 somites
1.08e4
  • 1.08e4
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.13e4
  • 1.13e4
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0009614hindbrain neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.15e4
  • 1.15e4
  • 1.15e4
  • 1.17e4
61.53
  • 61.53
  • 61.53
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.09
  • 60.09
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.25e4
  • 1.25e4
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.26e4
  • 1.26e4
  • 1.26e4
  • 1.27e4
  • 1.27e4
  • 1.28e4
57.87
  • 57.87
  • 57.87
  • 57.47
  • 57.47
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.63
  • 56.63
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.30e4
  • 1.30e4
  • 1.85e4
56.56
  • 56.56
  • 37.95
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.38
  • 52.38
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.66
  • 45.66
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.44
  • 44.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.00
  • 43.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000011724 (marveld1)
ZFINZDB-GENE-050208-33 (marveld1)
EMBLBC090512
Uniprot/SWISSPROTMALD1_DANRE, Q5BLB7

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