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D. rerio Gene: stag2a - ENSDARG00000011783 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011783
Namestag2a
Descriptionstromal antigen 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3432]
OrganismDanio rerio (zebrafish)
Synonym(s)fc39a01, si:dkeyp-20g2.6, wu:fc39a01
Orthologs(s)7 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.39e3
  • 3.39e3
88.66
  • 88.66
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
3.47e3
  • 3.47e3
  • 7.47e3
  • 1.01e4
  • 1.01e4
  • 1.26e4
88.39
  • 88.39
  • 75.00
  • 66.14
  • 66.05
  • 57.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.72
  • 86.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.13
  • 86.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.83
  • 84.83
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.82
  • 82.82
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
82.46
  • 82.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.47e3
  • 5.47e3
81.67
  • 81.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.52e3
  • 5.52e3
  • 6.84e3
81.51
  • 81.51
  • 77.11
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.98e3
  • 5.98e3
  • 8.32e3
79.97
  • 79.97
  • 72.16
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.56
  • 79.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.11
  • 79.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.99
  • 78.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.35e3
  • 6.35e3
  • 1.60e4
78.75
  • 78.75
  • 46.48
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.59e3
  • 6.59e3
  • 6.66e3
  • 7.06e3
  • 8.70e3
77.92
  • 77.92
  • 77.71
  • 76.36
  • 70.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
6.61e3
  • 6.61e3
  • 7.90e3
  • 8.59e3
  • 8.97e3
  • 9.96e3
  • 1.02e4
  • 1.37e4
  • 1.38e4
  • 1.49e4
  • 1.52e4
77.88
  • 77.88
  • 73.55
  • 71.23
  • 69.98
  • 66.65
  • 65.71
  • 54.27
  • 53.85
  • 50.23
  • 49.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
76.47
  • 76.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.24
  • 76.24
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.31e3
  • 7.31e3
75.52
  • 75.52
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.42e3
  • 7.42e3
75.15
  • 75.15
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.48e3
  • 7.48e3
  • 1.24e4
  • 1.25e4
74.94
  • 74.94
  • 58.46
  • 58.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.82e3
  • 7.82e3
73.81
  • 73.81
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.85e3
  • 7.85e3
73.73
  • 73.73
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
72.60
  • 72.60
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
9.00e3
  • 9.00e3
  • 9.87e3
  • 1.26e4
  • 1.27e4
  • 1.27e4
  • 1.34e4
69.87
  • 69.87
  • 66.94
  • 57.97
  • 57.39
  • 57.33
  • 55.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.19e3
  • 9.19e3
69.24
  • 69.24
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
  • 9.72e3
68.66
  • 68.66
  • 67.47
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
  • 1.23e4
  • 1.29e4
  • 1.29e4
  • 1.29e4
  • 1.31e4
  • 1.32e4
  • 1.32e4
  • 1.36e4
  • 1.37e4
  • 1.38e4
  • 1.39e4
  • 1.42e4
  • 1.44e4
  • 1.44e4
  • 1.49e4
  • 1.50e4
64.18
  • 64.18
  • 58.72
  • 56.96
  • 56.93
  • 56.85
  • 56.12
  • 55.93
  • 55.74
  • 54.58
  • 54.14
  • 53.76
  • 53.62
  • 52.52
  • 51.88
  • 51.88
  • 50.25
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.08e4
  • 1.08e4
63.87
  • 63.87
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.13e4
  • 1.13e4
62.13
  • 62.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria7 species7 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011783.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Metazoa4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000011783.

Cross-references

EnsemblENSDARG00000011783 (stag2a)
ZFINZDB-GENE-030131-3432 (stag2a)
EMBLCR926467
Uniprot/SPTREMBLA5WV17, A5WV17_DANRE

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