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D. rerio Gene: inaa - ENSDARG00000011862 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011862
Nameinaa
Descriptioninternexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-67n3.6
Orthologs(s)15 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
138
  • 138
  • 1.21e3
  • 1.20e4
99.54
  • 99.54
  • 95.95
  • 59.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
2.89e3
  • 2.89e3
  • 6.02e3
  • 6.74e3
  • 7.75e3
  • 8.43e3
  • 8.79e3
  • 8.82e3
  • 1.01e4
  • 1.03e4
  • 1.25e4
  • 1.35e4
  • 1.47e4
  • 1.52e4
  • 1.62e4
90.34
  • 90.34
  • 79.84
  • 77.43
  • 74.05
  • 71.76
  • 70.57
  • 70.47
  • 66.16
  • 65.48
  • 58.04
  • 54.82
  • 50.90
  • 49.05
  • 45.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
3.55e3
  • 3.55e3
  • 5.32e3
  • 5.48e3
  • 5.69e3
  • 7.26e3
  • 1.10e4
88.10
  • 88.10
  • 82.18
  • 81.66
  • 80.93
  • 75.71
  • 63.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
3.91e3
  • 3.91e3
  • 1.04e4
  • 1.05e4
  • 1.34e4
  • 1.42e4
  • 1.69e4
  • 1.70e4
  • 1.88e4
  • 1.89e4
86.90
  • 86.90
  • 65.17
  • 64.86
  • 55.15
  • 52.33
  • 43.52
  • 43.18
  • 37.05
  • 36.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.16e3
  • 5.16e3
  • 8.53e3
  • 1.15e4
82.71
  • 82.71
  • 71.45
  • 61.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.94e3
  • 5.94e3
  • 1.46e4
80.13
  • 80.13
  • 51.07
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.27e3
  • 7.27e3
75.67
  • 75.67
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.65e3
  • 7.65e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
8.75e3
  • 8.75e3
  • 1.05e4
  • 1.07e4
  • 1.07e4
  • 1.24e4
70.69
  • 70.69
  • 64.96
  • 64.20
  • 64.06
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.30
  • 70.30
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.08e4
  • 1.08e4
63.81
  • 63.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.19e4
  • 1.19e4
60.08
  • 60.08
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.89
  • 53.89
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.45e4
  • 1.45e4
51.36
  • 51.36
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.93
  • 48.93
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.57
  • 47.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.11
  • 44.11
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.78
  • 42.78
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.41
  • 41.41
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.42
  • 36.42
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.77
  • 31.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
28.98
  • 28.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
16.82
  • 16.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000011862.

Cross-references

EnsemblENSDARG00000011862 (inaa)
ZFINZDB-GENE-060531-65 (inaa)
EMBLAL928951
Uniprot/SPTREMBLA2ATX5, A2ATX5_DANRE

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