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D. rerio Gene: ptk7a - ENSDARG00000011863 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011863
Nameptk7a
Descriptionprotein tyrosine kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050522-216]
OrganismDanio rerio (zebrafish)
Synonym(s)ptk7, zgc:112211
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.54e3
  • 1.54e3
  • 4.41e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 1.25e4
  • 1.50e4
  • 1.50e4
94.85
  • 94.85
  • 85.22
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 57.99
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.55e3
  • 1.55e3
  • 1.86e3
94.80
  • 94.80
  • 93.76
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.58e3
  • 1.58e3
94.72
  • 94.72
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.80e3
  • 1.80e3
  • 1.92e3
93.97
  • 93.97
  • 93.58
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
3.62e3
  • 3.62e3
  • 4.57e3
  • 4.60e3
  • 4.88e3
  • 1.11e4
87.88
  • 87.88
  • 84.71
  • 84.59
  • 83.66
  • 62.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.91e3
  • 4.91e3
  • 7.40e3
83.56
  • 83.56
  • 75.24
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.79e3
  • 5.79e3
  • 8.47e3
80.61
  • 80.61
  • 71.63
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.48
  • 80.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.20e3
  • 6.20e3
79.24
  • 79.24
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.71
  • 78.71
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.39e3
  • 7.39e3
75.25
  • 75.25
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.91e3
  • 8.91e3
70.17
  • 70.17
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.99e3
  • 8.99e3
69.88
  • 69.88
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
69.38
  • 69.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.69
  • 67.69
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.45
  • 65.45
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.44
  • 64.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.80
  • 63.80
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
  • 1.23e4
  • 1.48e4
  • 1.49e4
62.50
  • 62.50
  • 58.76
  • 50.42
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.75
  • 59.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.68
  • 59.68
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.97
  • 55.97
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
55.90
  • 55.90
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
  • 1.38e4
55.53
  • 55.53
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.35e4
54.99
  • 54.99
  • 54.75
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011863.

Cross-references

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