D. rerio Gene: gyg1a - ENSDARG00000011934 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011934
Namegyg1a
Descriptionglycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
OrganismDanio rerio (zebrafish)
Synonym(s)fc13d04, fi23f07, gyg, gyg1, gyg1 {eco:0000313|embl:aah68329.1,gn eco:0000313|zfin:zdb-gene-040426-2910}, wu:fc13d04, wu:fi23f07, zgc:55385, zgc:85619
Orthologs(s)4 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
50.7
  • 50.7
  • 73.3
  • 130
  • 379
  • 559
99.83
  • 99.83
  • 99.76
  • 99.57
  • 98.73
  • 98.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
142
  • 142
  • 199
  • 1.22e3
  • 1.94e3
  • 2.32e3
  • 2.91e3
  • 3.37e3
  • 5.27e3
  • 5.75e3
  • 7.78e3
  • 7.83e3
  • 7.92e3
  • 8.78e3
  • 9.03e3
  • 1.43e4
  • 1.45e4
  • 1.47e4
99.53
  • 99.53
  • 99.34
  • 95.92
  • 93.50
  • 92.24
  • 90.26
  • 88.71
  • 82.34
  • 80.74
  • 73.96
  • 73.78
  • 73.49
  • 70.60
  • 69.77
  • 52.23
  • 51.56
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
168
  • 168
  • 1.41e4
99.44
  • 99.44
  • 52.84
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
217
  • 217
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
300
  • 300
99.00
  • 99.00
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
345
  • 345
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
362
  • 362
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
408
  • 408
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
582
  • 582
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
649
  • 649
  • 661
  • 725
  • 881
  • 4.42e3
  • 4.91e3
97.83
  • 97.83
  • 97.79
  • 97.57
  • 97.05
  • 85.20
  • 83.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
661
  • 661
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
745
  • 745
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
748
  • 748
97.50
  • 97.50
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.50
  • 96.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.49e3
  • 1.49e3
  • 2.51e3
95.02
  • 95.02
  • 91.59
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.00
  • 94.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.80e3
  • 1.80e3
  • 1.35e4
93.98
  • 93.98
  • 54.73
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.89e3
  • 1.89e3
  • 3.72e3
93.68
  • 93.68
  • 87.54
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
2.00e3
  • 2.00e3
  • 1.12e4
  • 1.21e4
93.31
  • 93.31
  • 62.48
  • 59.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
2.32e3
  • 2.32e3
  • 4.30e3
  • 4.97e3
  • 6.26e3
  • 7.33e3
  • 8.06e3
  • 8.84e3
  • 9.33e3
  • 9.46e3
  • 1.13e4
92.25
  • 92.25
  • 85.59
  • 83.37
  • 79.03
  • 75.47
  • 73.01
  • 70.40
  • 68.75
  • 68.33
  • 62.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.20
  • 92.20
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.57e3
  • 2.57e3
  • 3.56e3
  • 5.33e3
91.40
  • 91.40
  • 88.09
  • 82.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.62e3
  • 2.62e3
91.24
  • 91.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.44e3
  • 3.44e3
  • 4.46e3
  • 1.19e4
  • 1.19e4
88.49
  • 88.49
  • 85.07
  • 60.31
  • 60.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.46e3
  • 4.46e3
  • 9.18e3
  • 1.49e4
85.07
  • 85.07
  • 69.26
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.34e3
  • 5.34e3
  • 8.41e3
82.13
  • 82.13
  • 71.85
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.53e3
  • 6.53e3
78.13
  • 78.13
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
8.36e3
  • 8.36e3
  • 1.29e4
72.00
  • 72.00
  • 56.86
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.61e3
  • 9.61e3
67.83
  • 67.83
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.00e4
  • 1.00e4
66.38
  • 66.38
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.06e4
  • 1.06e4
64.43
  • 64.43
AEIR
  • AEIR
UBERON:0003895hypaxial myotome region
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.16e4
  • 1.16e4
  • 1.16e4
61.10
  • 61.10
  • 61.10
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.18e4
  • 1.18e4
  • 1.21e4
  • 1.23e4
60.50
  • 60.50
  • 59.50
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
  • 1.33e4
  • 1.34e4
59.98
  • 59.98
  • 58.31
  • 58.31
  • 55.53
  • 55.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.34e4
  • 1.34e4
  • 1.34e4
55.24
  • 55.24
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria4 species4 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011934.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000011934.

Cross-references

EnsemblENSDARG00000011934 (gyg1a)
ZFINZDB-GENE-040426-2910 (gyg1a)
EMBLBC068329, BC097080, BC164360, CR788256
Uniprot/SPTREMBLQ6NV37, Q6NV37_DANRE

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