D. rerio Gene: ctnnbl1 - ENSDARG00000011958 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011958
Namectnnbl1
Descriptioncatenin, beta like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1850]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77673
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
820
  • 820
97.26
  • 97.26
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.36e3
  • 1.36e3
95.44
  • 95.44
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.09e3
  • 2.09e3
  • 2.74e3
  • 4.77e3
  • 6.18e3
  • 7.17e3
93.02
  • 93.02
  • 90.81
  • 84.03
  • 79.31
  • 75.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.21e3
  • 2.21e3
  • 2.24e3
  • 2.62e3
  • 3.25e3
  • 3.92e3
  • 4.03e3
92.59
  • 92.59
  • 92.50
  • 91.22
  • 89.11
  • 86.89
  • 86.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
2.27e3
  • 2.27e3
  • 2.39e3
  • 2.69e3
  • 2.76e3
  • 3.26e3
  • 3.61e3
  • 3.66e3
  • 6.07e3
  • 6.76e3
  • 6.94e3
92.42
  • 92.42
  • 92.02
  • 90.99
  • 90.78
  • 89.10
  • 87.92
  • 87.76
  • 79.67
  • 77.36
  • 76.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.56e3
  • 2.56e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000036Larval:Day 4
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
2.96e3
  • 2.96e3
  • 3.04e3
  • 3.63e3
  • 3.85e3
  • 3.90e3
  • 3.97e3
  • 4.12e3
  • 4.37e3
  • 4.98e3
  • 5.11e3
  • 6.54e3
  • 6.62e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.86e3
  • 6.97e3
  • 7.03e3
  • 7.45e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.41e3
  • 8.96e3
  • 8.96e3
  • 9.63e3
  • 1.44e4
  • 1.47e4
  • 1.49e4
  • 1.49e4
90.08
  • 90.08
  • 89.81
  • 87.83
  • 87.10
  • 86.94
  • 86.73
  • 86.22
  • 85.38
  • 83.33
  • 82.90
  • 78.12
  • 77.84
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.03
  • 76.66
  • 76.46
  • 75.06
  • 74.99
  • 74.99
  • 73.52
  • 71.83
  • 69.99
  • 69.99
  • 67.76
  • 51.82
  • 50.90
  • 50.25
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.05e3
  • 3.05e3
  • 8.37e3
89.79
  • 89.79
  • 71.98
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
89.76
  • 89.76
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.12e3
  • 3.12e3
89.57
  • 89.57
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.38e3
  • 3.38e3
88.67
  • 88.67
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.10
  • 86.10
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.27e3
  • 4.27e3
85.71
  • 85.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.29e3
  • 4.29e3
85.63
  • 85.63
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.43e3
  • 4.43e3
  • 6.79e3
85.18
  • 85.18
  • 77.27
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.51e3
  • 4.51e3
  • 5.79e3
  • 7.66e3
  • 1.19e4
84.90
  • 84.90
  • 80.63
  • 74.35
  • 60.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.84
  • 83.84
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.96e3
  • 4.96e3
83.40
  • 83.40
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.00e3
  • 5.00e3
83.25
  • 83.25
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
  • 7.75e3
82.89
  • 82.89
  • 74.07
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.44e3
  • 5.44e3
81.80
  • 81.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.67e3
  • 5.67e3
81.03
  • 81.03
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.50
  • 80.50
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.88e3
  • 5.88e3
  • 6.55e3
  • 8.17e3
80.32
  • 80.32
  • 78.08
  • 72.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.55e3
  • 6.55e3
78.07
  • 78.07
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.17
  • 77.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
75.38
  • 75.38
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
72.02
  • 72.02
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.77e3
  • 8.77e3
70.64
  • 70.64
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
69.72
  • 69.72
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.10e3
  • 9.10e3
  • 1.04e4
69.52
  • 69.52
  • 65.16
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.29
  • 59.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011958.

Cross-references

EnsemblENSDARG00000011958 (ctnnbl1)
ZFINZDB-GENE-040426-1850 (ctnnbl1)
EMBLBC063231, CABZ01067451, CU683872, CU683873, CU861888
Uniprot/SPTREMBLQ6P4V4, Q6P4V4_DANRE

Do not show this banner again