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D. rerio Gene: csrp2 - ENSDARG00000011961 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011961
Namecsrp2
Descriptioncysteine and glycine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1863]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77740
Orthologs(s)23 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
902
  • 902
96.98
  • 96.98
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
  • 6.35e3
91.52
  • 91.52
  • 78.74
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.45
  • 91.45
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
2.86e3
  • 2.86e3
  • 4.02e3
  • 5.25e3
  • 6.47e3
  • 6.92e3
90.42
  • 90.42
  • 86.54
  • 82.42
  • 78.33
  • 76.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
88.09
  • 88.09
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.58e3
  • 3.58e3
88.03
  • 88.03
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.83e3
  • 3.83e3
  • 4.37e3
87.19
  • 87.19
  • 85.35
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
87.10
  • 87.10
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
83.51
  • 83.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.04e3
  • 5.04e3
  • 5.67e3
83.11
  • 83.11
  • 81.03
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.29e3
  • 5.29e3
82.30
  • 82.30
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.03
  • 82.03
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.17
  • 81.17
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.68e3
  • 5.68e3
  • 6.10e3
80.97
  • 80.97
  • 79.59
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
74.76
  • 74.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.17e3
  • 8.17e3
72.66
  • 72.66
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.75
  • 71.75
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.07e3
  • 9.07e3
  • 9.44e3
69.62
  • 69.62
  • 68.40
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.60
  • 68.60
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.69e3
  • 9.69e3
67.57
  • 67.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.07
  • 58.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.06
  • 58.06
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.18
  • 55.18
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.49e4
  • 1.50e4
51.57
  • 51.57
  • 50.25
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011961.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000011961.

Cross-references

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