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D. rerio Gene: slc38a7 - ENSDARG00000012002 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012002
Nameslc38a7
Descriptionsolute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
OrganismDanio rerio (zebrafish)
Synonym(s)cb389, fb71c10, fi23b07, sb:cb389, wu:fb71c10, wu:fi23b07, zgc:100802
Orthologs(s)16 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
349
  • 349
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
781
  • 781
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.07e3
  • 1.07e3
  • 1.56e3
  • 2.74e3
  • 3.89e3
  • 4.56e3
96.43
  • 96.43
  • 94.79
  • 90.82
  • 86.97
  • 84.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.64e3
  • 1.64e3
  • 2.16e3
  • 3.15e3
  • 3.73e3
  • 3.74e3
  • 4.10e3
94.53
  • 94.53
  • 92.77
  • 89.44
  • 87.52
  • 87.47
  • 86.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.28e3
  • 2.28e3
92.36
  • 92.36
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
2.74e3
  • 2.74e3
  • 2.80e3
  • 5.48e3
  • 5.99e3
  • 7.20e3
  • 7.38e3
  • 7.91e3
  • 9.64e3
  • 9.94e3
  • 1.10e4
  • 1.11e4
  • 1.11e4
  • 1.14e4
  • 1.20e4
90.83
  • 90.83
  • 90.63
  • 81.66
  • 79.94
  • 75.90
  • 75.30
  • 73.51
  • 67.71
  • 66.72
  • 63.29
  • 62.92
  • 62.84
  • 61.68
  • 59.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.66
  • 90.66
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.93e3
  • 3.93e3
  • 4.20e3
  • 4.43e3
  • 4.97e3
  • 5.03e3
  • 5.85e3
  • 9.41e3
  • 1.00e4
  • 1.03e4
  • 1.37e4
86.84
  • 86.84
  • 85.94
  • 85.17
  • 83.35
  • 83.17
  • 80.40
  • 68.48
  • 66.46
  • 65.55
  • 54.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.44
  • 84.44
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.66e3
  • 5.66e3
81.06
  • 81.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
75.84
  • 75.84
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.18e3
  • 8.18e3
72.62
  • 72.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.61e3
  • 8.61e3
  • 8.90e3
71.17
  • 71.17
  • 70.21
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.67e3
  • 8.67e3
  • 1.09e4
  • 1.28e4
70.99
  • 70.99
  • 63.41
  • 57.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.61
  • 70.61
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.78
  • 69.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.61
  • 69.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.11e3
  • 9.11e3
69.51
  • 69.51
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.40e3
  • 9.40e3
  • 1.29e4
68.53
  • 68.53
  • 56.86
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.49
  • 65.49
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.41
  • 62.41
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
  • 1.23e4
  • 1.33e4
60.52
  • 60.52
  • 58.74
  • 55.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
59.78
  • 59.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.44
  • 59.44
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.97
  • 58.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.27e4
  • 1.27e4
  • 1.29e4
57.62
  • 57.62
  • 56.72
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.30e4
  • 1.30e4
  • 1.37e4
56.54
  • 56.54
  • 54.16
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.30e4
  • 1.30e4
56.34
  • 56.34
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
1.34e4
  • 1.34e4
  • 1.34e4
  • 1.37e4
  • 1.66e4
54.97
  • 54.97
  • 54.97
  • 54.13
  • 44.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.42
  • 54.42
AEIR
  • AEIR
UBERON:0001015musculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
  • 1.49e4
49.98
  • 49.98
  • 49.98
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012002.

Cross-references

EnsemblENSDARG00000012002 (slc38a7)
ZFINZDB-GENE-040801-266 (slc38a7)
EMBLBX957362
Uniprot/SPTREMBLF1QUV9, F1QUV9_DANRE

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