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D. rerio Gene: glra1 - ENSDARG00000012019 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012019
Nameglra1
Descriptionglycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
OrganismDanio rerio (zebrafish)
Synonym(s)[a]z1, glyr [a]z1
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.01e3
  • 5.01e3
  • 1.65e4
83.22
  • 83.22
  • 44.67
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.88e3
  • 6.88e3
76.96
  • 76.96
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
  • 1.26e4
74.19
  • 74.19
  • 57.80
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
7.77e3
  • 7.77e3
  • 1.30e4
  • 1.78e4
  • 2.13e4
73.98
  • 73.98
  • 56.46
  • 40.26
  • 28.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
8.96e3
  • 8.96e3
  • 1.08e4
69.99
  • 69.99
  • 63.87
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.18e4
  • 1.18e4
  • 1.39e4
60.50
  • 60.50
  • 53.53
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.65
  • 59.65
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
1.22e4
  • 1.22e4
  • 1.47e4
  • 1.50e4
  • 1.57e4
  • 1.59e4
  • 1.78e4
  • 1.79e4
58.99
  • 58.99
  • 50.90
  • 49.89
  • 47.36
  • 46.62
  • 40.56
  • 40.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.25e4
  • 1.25e4
  • 1.36e4
  • 1.57e4
58.09
  • 58.09
  • 54.39
  • 47.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.34e4
57.11
  • 57.11
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.67
  • 50.67
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.61
  • 47.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.84
  • 46.84
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.59e4
  • 1.59e4
46.65
  • 46.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.05
  • 46.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.64e4
  • 1.64e4
  • 1.75e4
44.93
  • 44.93
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.77
  • 44.77
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.71e4
  • 1.71e4
42.66
  • 42.66
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.04
  • 36.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.48
  • 32.48
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.21
  • 32.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.18
  • 29.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012019.

Cross-references

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