D. rerio Gene: dnaaf1 - ENSDARG00000012030 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012030
Namednaaf1
Descriptiondynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
OrganismDanio rerio (zebrafish)
Synonym(s)loc123872, lrrc50, switch hitter, swt, unm tm317b, zgc:56169

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
966
  • 966
96.73802
  • 96.73802
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
  • 1.62e4
71.99445
  • 71.99445
  • 45.20812
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
61.74607
  • 61.74607
AEIR
  • AEIR
ZFA:0000023forerunner cell group (Danio)
  • ZFS:0000021Gastrula:90%-epiboly
1.25e4
  • 1.25e4
57.67708
  • 57.67708
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
1.33e4
  • 1.33e4
  • 1.48e4
54.97294
  • 54.97294
  • 49.99831
AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000025Segmentation:10-13 somites
1.36e4
  • 1.36e4
54.15145
  • 54.15145
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.48216
  • 53.48216
AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000027Segmentation:20-25 somites
1.40e4
  • 1.40e4
52.75244
  • 52.75244
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000027Segmentation:20-25 somites
1.41e4
  • 1.41e4
52.47126
  • 52.47126
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000066fully formed stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.47e4
  • 1.47e4
  • 1.68e4
  • 1.75e4
  • 1.76e4
  • 1.77e4
  • 1.80e4
50.24552
  • 50.24552
  • 43.38213
  • 40.74213
  • 40.42179
  • 40.05343
  • 39.29189
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
50.00000
  • 50.00000
AEIR
  • AEIR
UBERON:0010202lateral line
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
49.99831
  • 49.99831
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
1.48e4
  • 1.48e4
  • 1.78e4
49.99493
  • 49.99493
  • 39.73294
AEIR
  • AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000025Segmentation:10-13 somites
1.48e4
  • 1.48e4
49.98648
  • 49.98648
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.50e4
  • 1.50e4
  • 1.55e4
  • 1.58e4
  • 1.61e4
  • 1.80e4
  • 1.83e4
49.26740
  • 49.26740
  • 47.54554
  • 46.47988
  • 45.72854
  • 39.19862
  • 38.22898
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
47.82756
  • 47.82756
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.55737
  • 41.55737
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.26531
  • 37.26531
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.33830
  • 34.33830
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.32341
  • 31.32341
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR376738
EnsemblENSDARG00000012030 (dnaaf1)
Uniprot/SPTREMBLF1Q654, F1Q654_DANRE, F1R9Z8, F1R9Z8_DANRE
ZFINZDB-GENE-031114-4 (dnaaf1)

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