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D. rerio Gene: zgc:100832 - ENSDARG00000012035 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012035
Namezgc:100832
Descriptionzgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]
OrganismDanio rerio (zebrafish)
Orthologs(s)46 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.18e3
  • 3.18e3
89.36
  • 89.36
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.32e3
  • 4.32e3
85.55
  • 85.55
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.51e3
  • 4.51e3
84.91
  • 84.91
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
83.04
  • 83.04
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.60e3
  • 5.60e3
  • 7.46e3
81.24
  • 81.24
  • 75.04
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.86e3
  • 5.86e3
80.38
  • 80.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.72
  • 79.72
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.37e3
  • 6.37e3
78.69
  • 78.69
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.42e3
  • 6.42e3
  • 8.70e3
78.49
  • 78.49
  • 70.88
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.50e3
  • 6.50e3
  • 8.10e3
  • 9.48e3
78.24
  • 78.24
  • 72.89
  • 68.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
6.81e3
  • 6.81e3
  • 7.82e3
  • 8.18e3
  • 9.40e3
  • 9.49e3
  • 9.59e3
77.20
  • 77.20
  • 73.81
  • 72.60
  • 68.54
  • 68.23
  • 67.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.87e3
  • 6.87e3
76.99
  • 76.99
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
  • 9.23e3
74.12
  • 74.12
  • 69.10
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
8.15e3
  • 8.15e3
  • 1.04e4
  • 1.07e4
  • 1.08e4
  • 1.08e4
  • 1.09e4
  • 1.10e4
  • 1.13e4
  • 1.13e4
  • 1.14e4
  • 1.16e4
  • 1.17e4
  • 1.20e4
  • 1.45e4
  • 1.48e4
72.70
  • 72.70
  • 65.16
  • 64.30
  • 63.85
  • 63.72
  • 63.66
  • 63.07
  • 62.27
  • 62.05
  • 61.76
  • 61.21
  • 60.93
  • 59.69
  • 51.56
  • 50.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.35e3
  • 8.35e3
  • 8.42e3
  • 8.81e3
  • 9.63e3
  • 9.84e3
  • 1.06e4
  • 1.10e4
  • 1.14e4
  • 1.14e4
  • 1.19e4
72.05
  • 72.05
  • 71.79
  • 70.49
  • 67.75
  • 67.04
  • 64.36
  • 63.15
  • 61.91
  • 61.81
  • 60.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.26e3
  • 9.26e3
68.99
  • 68.99
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.37e3
  • 9.37e3
68.64
  • 68.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.72e3
  • 9.72e3
  • 1.16e4
67.45
  • 67.45
  • 61.00
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
  • 1.07e4
  • 1.11e4
65.37
  • 65.37
  • 64.21
  • 62.78
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.08
  • 65.08
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.92
  • 64.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.35
  • 61.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.16e4
  • 1.16e4
  • 1.17e4
61.03
  • 61.03
  • 60.97
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.40
  • 59.40
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.48
  • 53.48
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.84
  • 52.84
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.03
  • 39.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species46 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012035.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi5 genesCompare expression
Euteleostomi8 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012035.

Cross-references

EnsemblENSDARG00000012035 (zgc:100832)
ZFINZDB-GENE-040801-53 (zgc:100832)
EMBLAL732515
Uniprot/SPTREMBLA0A0J9YIY6, A0A0J9YIY6_DANRE, E9QG79, E9QG79_DANRE, F1Q8M7, F1Q8M7_DANRE

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