D. rerio Gene: ttc26 - ENSDARG00000012039 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012039
Namettc26
Descriptiontetratricopeptide repeat domain 26 [Source:ZFIN;Acc:ZDB-GENE-041212-41]
OrganismDanio rerio (zebrafish)
Synonym(s)f1qz19, ift56, im:7142924, zgc:103412
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
579
  • 579
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
90.68
  • 90.68
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.01e3
  • 3.01e3
89.92
  • 89.92
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.78e3
  • 3.78e3
  • 6.11e3
  • 6.77e3
  • 6.98e3
87.34
  • 87.34
  • 79.55
  • 77.34
  • 76.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.46e3
  • 4.46e3
85.08
  • 85.08
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
4.63e3
  • 4.63e3
  • 5.12e3
  • 5.31e3
  • 5.36e3
  • 5.90e3
84.51
  • 84.51
  • 82.87
  • 82.21
  • 82.04
  • 80.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
4.87e3
  • 4.87e3
  • 5.26e3
  • 5.54e3
  • 5.71e3
  • 6.12e3
  • 6.40e3
83.69
  • 83.69
  • 82.38
  • 81.45
  • 80.90
  • 79.51
  • 78.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.13e3
  • 5.13e3
82.82
  • 82.82
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.27e3
  • 5.27e3
82.35
  • 82.35
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.29e3
  • 5.29e3
82.30
  • 82.30
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
5.43e3
  • 5.43e3
  • 5.64e3
  • 6.70e3
  • 7.02e3
  • 7.54e3
  • 7.80e3
  • 7.98e3
  • 8.08e3
  • 8.66e3
  • 9.95e3
81.82
  • 81.82
  • 81.10
  • 77.56
  • 76.51
  • 74.74
  • 73.90
  • 73.30
  • 72.96
  • 71.00
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.65e3
  • 5.65e3
81.09
  • 81.09
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
6.74e3
  • 6.74e3
  • 7.44e3
  • 7.91e3
  • 8.05e3
  • 8.16e3
  • 8.89e3
  • 8.92e3
  • 9.91e3
  • 1.00e4
  • 1.01e4
  • 1.03e4
  • 1.06e4
  • 1.10e4
  • 1.12e4
  • 1.39e4
  • 1.43e4
77.43
  • 77.43
  • 75.07
  • 73.52
  • 73.06
  • 72.67
  • 70.23
  • 70.13
  • 66.82
  • 66.48
  • 66.19
  • 65.58
  • 64.58
  • 63.20
  • 62.53
  • 53.30
  • 52.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
75.12
  • 75.12
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.43e3
  • 7.43e3
75.12
  • 75.12
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.89e3
  • 7.89e3
73.59
  • 73.59
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.97e3
  • 7.97e3
73.33
  • 73.33
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.97e3
  • 7.97e3
  • 8.71e3
  • 1.08e4
  • 1.29e4
  • 1.29e4
  • 1.29e4
73.32
  • 73.32
  • 70.82
  • 63.87
  • 56.65
  • 56.65
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
  • 8.06e3
  • 1.49e4
73.08
  • 73.08
  • 73.02
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.14
  • 72.14
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
9.22e3
  • 9.22e3
  • 1.02e4
  • 1.09e4
69.12
  • 69.12
  • 65.73
  • 63.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
  • 1.03e4
68.90
  • 68.90
  • 65.64
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.09
  • 68.09
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.60e3
  • 9.60e3
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.69e3
  • 9.69e3
67.56
  • 67.56
AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.03e4
66.66
  • 66.66
  • 65.37
  • 65.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.28
  • 66.28
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
  • 1.15e4
66.25
  • 66.25
  • 61.60
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.73
  • 65.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
65.00
  • 65.00
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.69
  • 63.69
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.85
  • 60.85
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000026Segmentation:14-19 somites
1.20e4
  • 1.20e4
59.98
  • 59.98
AEIR
  • AEIR
ZFA:0000023forerunner cell group (Danio)
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
1.21e4
  • 1.21e4
  • 1.26e4
  • 1.26e4
  • 1.28e4
  • 1.36e4
  • 1.36e4
59.36
  • 59.36
  • 57.68
  • 57.68
  • 57.13
  • 54.53
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
1.25e4
  • 1.25e4
58.31
  • 58.31
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.88
  • 57.88
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.26e4
  • 1.26e4
  • 1.26e4
  • 1.28e4
57.87
  • 57.87
  • 57.87
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.95
  • 55.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.80
  • 50.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012039.

Cross-references

EnsemblENSDARG00000012039 (ttc26)
ZFINZDB-GENE-041212-41 (ttc26)
EMBLAL954384, BC086810
Uniprot/SWISSPROTIFT56_DANRE, Q5PR66

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