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D. rerio Gene: cnga1 - ENSDARG00000012125 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012125
Namecnga1
Descriptioncyclic nucleotide gated channel alpha 1 [Source:ZFIN;Acc:ZDB-GENE-110408-39]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-149b19.5
Orthologs(s)24 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.22e3
  • 5.22e3
  • 6.36e3
82.51
  • 82.51
  • 78.69
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.60e3
  • 7.60e3
74.56
  • 74.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.80
  • 54.80
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
1.42e4
  • 1.42e4
52.57
  • 52.57
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.65e4
  • 1.65e4
  • 2.61e4
44.68
  • 44.68
  • 12.61
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.75
  • 21.75
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.55e4
  • 2.55e4
14.70
  • 14.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.61e4
  • 2.61e4
12.74
  • 12.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012125.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression
Bilateria5 genesCompare expression
Eukaryota7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012125.

Cross-references

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