D. rerio Gene: zgc:162872 - ENSDARG00000012184 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012184
Namezgc:162872
Descriptionzgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
72.69974
  • 72.69974
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.17e3
  • 8.17e3
72.38267
  • 72.38267
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.49e3
  • 8.49e3
71.31136
  • 71.31136
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
64.80254
  • 64.80254
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
62.96661
  • 62.96661
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.33417
  • 62.33417
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.13e4
  • 1.13e4
  • 1.71e4
61.71903
  • 61.71903
  • 42.30168
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.21e4
  • 1.21e4
  • 1.25e4
  • 1.34e4
  • 1.38e4
  • 1.50e4
59.11311
  • 59.11311
  • 57.92000
  • 54.58824
  • 53.37607
  • 49.47162
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
57.78480
  • 57.78480
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.54761
  • 54.54761
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.05337
  • 54.05337
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
52.89406
  • 52.89406
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.38707
  • 52.38707
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.18044
  • 51.18044
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
48.55762
  • 48.55762
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.56e4
  • 1.56e4
47.16644
  • 47.16644
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCABZ01044055, CR381579
EnsemblENSDARG00000012184 (zgc:162872)
Uniprot/SPTREMBLF1Q975, F1Q975_DANRE, X1WFR3, X1WFR3_DANRE
ZFINZDB-GENE-081022-1 (zgc:162872)

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