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D. rerio Gene: CDK18 - ENSDARG00000012204 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012204
NameCDK18
Descriptionsi:dkey-166c18.1 [Source:ZFIN;Acc:ZDB-GENE-141215-51]
OrganismDanio rerio (zebrafish)
Synonym(s)cdk18, pctaire3, pctk3
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.83e3
  • 3.83e3
87.19
  • 87.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.42e3
  • 6.42e3
78.52
  • 78.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.33e3
  • 8.33e3
  • 1.73e4
72.13
  • 72.13
  • 42.12
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.38e3
  • 8.38e3
  • 1.20e4
71.94
  • 71.94
  • 59.75
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.36
  • 71.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.08e4
  • 1.08e4
  • 1.25e4
  • 1.56e4
  • 1.89e4
  • 2.12e4
63.95
  • 63.95
  • 58.23
  • 47.84
  • 36.61
  • 29.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.09
  • 50.09
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.63e4
  • 1.63e4
  • 1.77e4
45.31
  • 45.31
  • 40.67
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.97
  • 42.97
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.88e4
  • 1.88e4
37.17
  • 37.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.09
  • 37.09
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.65
  • 36.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
26.09
  • 26.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.75
  • 22.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
22.13
  • 22.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012204.

Cross-references

EnsemblENSDARG00000012204 (CDK18)
HGNCHGNC:8751 (CDK18)
ZFINZDB-GENE-141215-51 (si:dkey-166c18.1)
EMBLCR405711
Uniprot/SPTREMBLE7F9R5, E7F9R5_DANRE

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