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D. rerio Gene: cnga3b - ENSDARG00000012297 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012297
Namecnga3b
Descriptioncyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-222h13.2
Orthologs(s)24 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.88e3
  • 3.88e3
87.02
  • 87.02
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.47e3
  • 4.47e3
  • 1.04e4
85.03
  • 85.03
  • 65.23
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.78e4
  • 1.78e4
  • 2.25e4
40.32
  • 40.32
  • 24.71
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.82e4
  • 1.82e4
38.98
  • 38.98
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.91e4
  • 1.91e4
  • 2.45e4
35.92
  • 35.92
  • 17.97
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.54
  • 31.54
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.62
  • 27.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012297.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata4 genesCompare expression
Bilateria5 genesCompare expression
Eukaryota7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012297.

Cross-references

EnsemblENSDARG00000012297 (cnga3b)
ZFINZDB-GENE-090312-121 (cnga3b)
Uniprot/SPTREMBLE7F485, E7F485_DANRE, F1Q6M5, F1Q6M5_DANRE

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