D. rerio Gene: hsc70 - ENSDARG00000012381 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012381
Namehsc70
Descriptionheat shock cognate 70 [Source:ZFIN;Acc:ZDB-GENE-040426-1221]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:63663
Orthologs(s)13 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
169
  • 169
99.44
  • 99.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
213
  • 213
99.29
  • 99.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
238
  • 238
99.21
  • 99.21
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
328
  • 328
  • 1.14e3
  • 1.20e3
  • 1.28e3
  • 1.93e3
  • 6.02e3
  • 1.35e4
  • 1.37e4
  • 1.50e4
  • 1.60e4
  • 1.60e4
98.91
  • 98.91
  • 96.20
  • 95.99
  • 95.72
  • 93.55
  • 79.85
  • 54.83
  • 54.18
  • 49.80
  • 46.44
  • 46.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
461
  • 461
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
804
  • 804
  • 2.78e3
  • 6.83e3
  • 8.22e3
  • 1.46e4
  • 1.62e4
  • 1.64e4
97.31
  • 97.31
  • 90.69
  • 77.13
  • 72.48
  • 51.17
  • 45.90
  • 45.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
908
  • 908
96.96
  • 96.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
959
  • 959
  • 5.19e3
96.79
  • 96.79
  • 82.61
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.22e3
  • 1.22e3
  • 1.40e3
  • 1.87e3
95.93
  • 95.93
  • 95.30
  • 93.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.22e3
  • 1.22e3
  • 1.43e4
95.92
  • 95.92
  • 52.16
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.97
  • 90.97
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
89.46
  • 89.46
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.33
  • 81.33
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
79.65
  • 79.65
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.25e3
  • 9.25e3
69.03
  • 69.03
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
9.65e3
  • 9.65e3
  • 1.32e4
67.70
  • 67.70
  • 55.96
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.01
  • 63.01
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.16e4
  • 1.16e4
  • 1.81e4
61.10
  • 61.10
  • 39.52
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.16e4
  • 1.16e4
  • 1.18e4
  • 1.20e4
  • 1.25e4
61.09
  • 61.09
  • 60.50
  • 59.98
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.18
  • 60.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.19
  • 59.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.22e4
  • 1.22e4
  • 1.74e4
59.13
  • 59.13
  • 41.66
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.89
  • 48.89
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.56e4
  • 1.56e4
47.68
  • 47.68
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.58
  • 46.58
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.89
  • 45.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000012381.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia2 genesCompare expression
Bilateria3 genesCompare expression
Eumetazoa7 genesCompare expression
Eukaryota9 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012381.

Cross-references

EnsemblENSDARG00000012381 (hsc70)
ZFINZDB-GENE-040426-1221 (hsc70)
EMBLBC056797, CR944667
Uniprot/SPTREMBLQ6PGX4, Q6PGX4_DANRE

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