D. rerio Gene: adssl - ENSDARG00000012399 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012399
Nameadssl
Descriptionadenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
OrganismDanio rerio (zebrafish)
Synonym(s)adss, adss2, chunp6912, zgc:66318
Orthologs(s)7 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
1.30e3
  • 1.30e3
  • 1.68e3
  • 2.02e3
  • 2.32e3
  • 2.45e3
95.67
  • 95.67
  • 94.37
  • 93.25
  • 92.24
  • 91.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.32e3
  • 1.32e3
  • 1.52e3
  • 2.22e3
  • 2.25e3
  • 2.69e3
  • 2.71e3
95.59
  • 95.59
  • 94.91
  • 92.56
  • 92.48
  • 91.01
  • 90.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.38
  • 95.38
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.40e3
  • 1.40e3
  • 1.54e3
  • 1.59e3
  • 1.61e3
  • 1.62e3
  • 2.02e3
  • 2.37e3
  • 3.71e3
  • 5.21e3
  • 5.32e3
95.33
  • 95.33
  • 94.86
  • 94.67
  • 94.61
  • 94.58
  • 93.24
  • 92.06
  • 87.57
  • 82.54
  • 82.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
  • 1.50e4
95.31
  • 95.31
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.52e3
  • 1.52e3
  • 1.58e3
  • 1.71e3
  • 1.72e3
  • 1.74e3
  • 1.75e3
  • 2.06e3
  • 2.34e3
  • 2.40e3
  • 2.63e3
  • 2.74e3
  • 3.76e3
  • 3.76e3
  • 6.27e3
  • 1.28e4
  • 1.44e4
  • 1.44e4
94.91
  • 94.91
  • 94.70
  • 94.29
  • 94.24
  • 94.18
  • 94.15
  • 93.12
  • 92.18
  • 91.97
  • 91.19
  • 90.83
  • 87.40
  • 87.40
  • 79.02
  • 57.23
  • 51.88
  • 51.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.50
  • 94.50
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.67e3
  • 1.67e3
94.41
  • 94.41
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.68e3
  • 1.68e3
  • 3.32e3
  • 1.21e4
94.38
  • 94.38
  • 88.88
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.80e3
  • 1.80e3
93.98
  • 93.98
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.88e3
  • 1.88e3
93.71
  • 93.71
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.93e3
  • 1.93e3
93.54
  • 93.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.15
  • 93.15
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.95
  • 92.95
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
92.52
  • 92.52
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
  • 4.91e3
  • 7.42e3
  • 8.35e3
91.93
  • 91.93
  • 83.55
  • 75.15
  • 72.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.53e3
  • 2.53e3
91.53
  • 91.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.72e3
  • 2.72e3
  • 4.00e3
90.91
  • 90.91
  • 86.60
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.79e3
  • 2.79e3
  • 1.50e4
90.67
  • 90.67
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.81e3
  • 2.81e3
90.60
  • 90.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
90.14
  • 90.14
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.93
  • 89.93
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
89.05
  • 89.05
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.45e3
  • 3.45e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.49e3
  • 3.49e3
88.31
  • 88.31
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
3.71e3
  • 3.71e3
  • 4.15e3
  • 4.59e3
87.58
  • 87.58
  • 86.09
  • 84.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
87.11
  • 87.11
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
  • 4.65e3
86.85
  • 86.85
  • 84.43
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.11
  • 86.11
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.37e3
  • 4.37e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.98
  • 84.98
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.71e3
  • 4.71e3
  • 5.48e3
84.22
  • 84.22
  • 81.65
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.19
  • 77.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria7 species7 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012399.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012399.

Cross-references

EnsemblENSDARG00000012399 (adssl)
ZFINZDB-GENE-020419-28 (adssl)
EMBLCR631122
Uniprot/SPTREMBLF1Q9U6, F1Q9U6_DANRE

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