D. rerio Gene: mgat1a - ENSDARG00000012407 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012407
Namemgat1a
Descriptionmannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:66030

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.46085
  • 95.46085
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.24e3
  • 2.24e3
  • 3.25e3
  • 8.29e3
92.44814
  • 92.44814
  • 89.02374
  • 71.99202
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.87e3
  • 2.87e3
90.31518
  • 90.31518
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.71828
  • 89.71828
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
86.77099
  • 86.77099
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.28292
  • 83.28292
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.15e3
  • 5.15e3
82.58327
  • 82.58327
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.18e3
  • 5.18e3
82.48542
  • 82.48542
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
  • 7.43e3
81.92944
  • 81.92944
  • 74.87650
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
80.65334
  • 80.65334
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.78e3
  • 5.78e3
80.47082
  • 80.47082
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.91e3
  • 5.91e3
80.03143
  • 80.03143
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.50755
  • 79.50755
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
6.34e3
  • 6.34e3
  • 6.89e3
  • 7.38e3
  • 7.96e3
  • 8.09e3
78.57570
  • 78.57570
  • 76.71445
  • 75.06552
  • 73.11588
  • 72.66321
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.18978
  • 78.18978
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
6.50e3
  • 6.50e3
  • 7.60e3
  • 8.66e3
  • 8.81e3
  • 8.93e3
  • 9.55e3
  • 9.61e3
  • 9.66e3
  • 9.74e3
  • 1.03e4
  • 1.10e4
  • 1.11e4
  • 1.14e4
  • 1.16e4
78.02173
  • 78.02173
  • 74.32349
  • 70.72796
  • 70.24153
  • 69.80770
  • 67.72900
  • 67.53790
  • 67.35001
  • 67.07582
  • 65.21961
  • 62.87369
  • 62.47045
  • 61.40019
  • 60.66070
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
76.96923
  • 76.96923
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.30e3
  • 7.30e3
  • 8.80e3
  • 9.90e3
  • 9.96e3
  • 1.03e4
  • 1.05e4
  • 1.07e4
  • 1.09e4
  • 1.17e4
  • 1.18e4
75.33355
  • 75.33355
  • 70.25875
  • 66.53822
  • 66.34502
  • 65.02935
  • 64.48380
  • 63.73184
  • 63.04058
  • 60.37303
  • 60.28138
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.99e3
  • 7.99e3
72.98555
  • 72.98555
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.10e3
  • 8.10e3
72.62221
  • 72.62221
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.99e3
  • 8.99e3
  • 9.03e3
  • 1.07e4
69.60270
  • 69.60270
  • 69.47569
  • 63.79551
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.06e3
  • 9.06e3
69.39341
  • 69.39341
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.37218
  • 69.37218
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.20e3
  • 9.20e3
  • 9.79e3
  • 1.11e4
68.90812
  • 68.90812
  • 66.92248
  • 62.57881
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.69e3
  • 9.69e3
  • 1.32e4
67.24868
  • 67.24868
  • 55.46153
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.45937
  • 66.45937
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
63.99943
  • 63.99943
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
  • 1.27e4
58.52162
  • 58.52162
  • 57.23763
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX629344
EnsemblENSDARG00000012407 (mgat1a)
Uniprot/SPTREMBLF1QTA6, F1QTA6_DANRE
ZFINZDB-GENE-040426-1515 (mgat1a)

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