D. rerio Gene: rassf4 - ENSDARG00000012460 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012460
Namerassf4
DescriptionRas association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92261
Orthologs(s)14 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
88.83
  • 88.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.73
  • 86.73
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.43e3
  • 4.43e3
85.16
  • 85.16
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.45e3
  • 7.45e3
  • 1.35e4
75.04
  • 75.04
  • 54.96
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.90e3
  • 7.90e3
73.56
  • 73.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.30e3
  • 8.30e3
72.21
  • 72.21
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
  • 1.63e4
70.85
  • 70.85
  • 45.48
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.82e3
  • 8.82e3
70.48
  • 70.48
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.14e3
  • 9.14e3
69.39
  • 69.39
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
67.16
  • 67.16
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.80
  • 66.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.30
  • 64.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.54
  • 62.54
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.19e4
  • 1.19e4
  • 1.75e4
59.99
  • 59.99
  • 41.30
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
  • 1.23e4
  • 1.69e4
  • 1.78e4
  • 1.87e4
59.59
  • 59.59
  • 58.73
  • 43.43
  • 40.36
  • 37.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
58.14
  • 58.14
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
56.26
  • 56.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.68
  • 55.68
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.44e4
  • 1.44e4
51.93
  • 51.93
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.61
  • 51.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.26
  • 51.26
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.46e4
  • 1.46e4
  • 1.51e4
51.12
  • 51.12
  • 49.55
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.29
  • 47.29
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.88
  • 42.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012460.

Cross-references

EnsemblENSDARG00000012460 (rassf4)
ZFINZDB-GENE-050102-3 (rassf4)
EMBLBC088388, CR762483, CT025887
Uniprot/SPTREMBLB8JII7, B8JII7_DANRE, Q5M7X7, Q5M7X7_DANRE

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