D. rerio Gene: dnase1 - ENSDARG00000012539 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012539
Namednase1
Descriptiondeoxyribonuclease I [Source:ZFIN;Acc:ZDB-GENE-040718-423]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92440
Orthologs(s)33 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.50e3
  • 2.50e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.95
  • 77.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.99
  • 63.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.31
  • 56.31
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
1.47e4
  • 1.47e4
  • 1.49e4
  • 1.61e4
  • 1.83e4
50.90
  • 50.90
  • 50.25
  • 46.06
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.79e4
  • 1.79e4
  • 1.99e4
39.97
  • 39.97
  • 33.51
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.91
  • 33.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.13
  • 32.13
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.24e4
  • 2.24e4
25.04
  • 25.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000012539.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression
Eumetazoa4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012539.

Cross-references

EnsemblENSDARG00000012539 (dnase1)
ZFINZDB-GENE-040718-423 (dnase1)
EMBLBC076479, BX936335
Uniprot/SPTREMBLQ6DG72, Q6DG72_DANRE

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