D. rerio Gene: slkb - ENSDARG00000012574 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012574
Nameslkb
DescriptionSTE20-like kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-1684]
OrganismDanio rerio (zebrafish)
Synonym(s)fb78a01, si:ch211-281g13.2, wu:fb78a01
Orthologs(s)23 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.94e3
  • 3.94e3
  • 5.96e3
86.82
  • 86.82
  • 80.03
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.32e3
  • 5.32e3
82.20
  • 82.20
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
5.46e3
  • 5.46e3
  • 5.98e3
  • 7.52e3
  • 8.65e3
  • 9.62e3
81.73
  • 81.73
  • 79.98
  • 74.81
  • 71.03
  • 67.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.52e3
  • 5.52e3
81.51
  • 81.51
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.27
  • 78.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.61
  • 77.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
75.56
  • 75.56
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.10e3
  • 8.10e3
  • 1.09e4
72.87
  • 72.87
  • 63.51
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
  • 1.20e4
70.49
  • 70.49
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.89e3
  • 8.89e3
  • 1.16e4
70.24
  • 70.24
  • 61.22
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.10
  • 68.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.75e3
  • 9.75e3
67.37
  • 67.37
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.96
  • 61.96
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.21
  • 60.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.24e4
  • 1.24e4
  • 1.35e4
58.58
  • 58.58
  • 54.73
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.30
  • 58.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.13
  • 58.13
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.75
  • 56.75
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.58
  • 55.58
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.52
  • 55.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.60
  • 52.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.44e4
  • 1.44e4
51.80
  • 51.80
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.30
  • 47.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012574.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Metazoa3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012574.

Cross-references

EnsemblENSDARG00000012574 (slkb)
ZFINZDB-GENE-030131-1684 (slkb)
EMBLBX321880
Uniprot/SPTREMBLB8A4S3, B8A4S3_DANRE

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