D. rerio Gene: eif1b - ENSDARG00000012688 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012688
Nameeif1b
Descriptioneukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
OrganismDanio rerio (zebrafish)
Synonym(s)gc20, sui1-rs1, wu:fb54a12, wu:fb64g08, wu:fk63g02, zgc:56459, zgc:85781
Orthologs(s)46 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
162
  • 162
  • 1.80e3
  • 3.46e3
  • 4.00e3
99.46
  • 99.46
  • 93.98
  • 88.42
  • 86.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
194
  • 194
  • 253
  • 781
  • 1.13e3
  • 1.16e3
99.36
  • 99.36
  • 99.16
  • 97.39
  • 96.21
  • 96.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
199
  • 199
  • 340
  • 582
  • 898
  • 966
  • 1.43e3
99.34
  • 99.34
  • 98.86
  • 98.05
  • 97.00
  • 96.77
  • 95.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
234
  • 234
  • 360
99.22
  • 99.22
  • 98.80
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
239
  • 239
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
242
  • 242
99.19
  • 99.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
252
  • 252
  • 875
  • 1.21e4
99.16
  • 99.16
  • 97.07
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
281
  • 281
  • 776
  • 7.89e3
99.06
  • 99.06
  • 97.40
  • 73.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
283
  • 283
99.06
  • 99.06
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
291
  • 291
99.03
  • 99.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
293
  • 293
99.02
  • 99.02
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
307
  • 307
98.98
  • 98.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
318
  • 318
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
324
  • 324
  • 330
  • 373
  • 415
  • 544
  • 554
  • 568
  • 571
  • 968
  • 3.81e3
98.92
  • 98.92
  • 98.90
  • 98.75
  • 98.61
  • 98.18
  • 98.15
  • 98.10
  • 98.09
  • 96.76
  • 87.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
338
  • 338
98.87
  • 98.87
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
356
  • 356
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
387
  • 387
  • 410
  • 460
98.71
  • 98.71
  • 98.63
  • 98.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
432
  • 432
  • 482
  • 536
  • 538
  • 552
  • 566
  • 624
  • 650
  • 666
  • 676
  • 725
  • 725
  • 785
  • 2.01e3
  • 1.11e4
  • 1.30e4
  • 1.35e4
  • 1.38e4
98.56
  • 98.56
  • 98.39
  • 98.21
  • 98.20
  • 98.16
  • 98.11
  • 97.92
  • 97.83
  • 97.77
  • 97.74
  • 97.57
  • 97.57
  • 97.38
  • 93.28
  • 62.75
  • 56.36
  • 54.64
  • 53.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
475
  • 475
98.41
  • 98.41
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
505
  • 505
98.31
  • 98.31
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
510
  • 510
  • 1.63e3
98.29
  • 98.29
  • 94.54
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
560
  • 560
98.13
  • 98.13
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
689
  • 689
97.70
  • 97.70
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
863
  • 863
97.11
  • 97.11
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
924
  • 924
  • 1.50e4
96.91
  • 96.91
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.13e3
  • 1.13e3
96.21
  • 96.21
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.88e3
  • 1.88e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.17
  • 91.17
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.15e3
  • 3.15e3
89.46
  • 89.46
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.21e3
  • 3.21e3
89.24
  • 89.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.32e3
  • 3.32e3
88.88
  • 88.88
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.40e3
  • 3.40e3
88.61
  • 88.61
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.95
  • 85.95
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
  • 1.14e4
72.97
  • 72.97
  • 61.80
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
8.88e3
  • 8.88e3
70.25
  • 70.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species38 genesCompare expression
Bilateria26 species46 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012688.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000012688.

Cross-references

EnsemblENSDARG00000012688 (eif1b)
ZFINZDB-GENE-030131-956 (eif1b)
EMBLAY398352, BC049025, BC067620, BX323079
Uniprot/SPTREMBLQ7ZUI8, Q7ZUI8_DANRE

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