D. rerio Gene: bbx - ENSDARG00000012699 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012699
Namebbx
Descriptionbobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-55i2.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
3.76e3
  • 3.76e3
  • 9.62e3
  • 1.42e4
  • 1.56e4
  • 1.63e4
87.28974
  • 87.28974
  • 67.49193
  • 51.99939
  • 47.42535
  • 44.84877
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:00072334 cell stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
4.37e3
  • 4.37e3
  • 6.73e3
  • 6.73e3
  • 8.88e3
85.21917
  • 85.21917
  • 77.26767
  • 77.26767
  • 69.98817
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
81.98972
  • 81.98972
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000034Hatching:Pec-fin
6.38e3
  • 6.38e3
  • 9.86e3
  • 9.86e3
  • 1.11e4
  • 1.11e4
  • 1.15e4
  • 1.48e4
  • 1.48e4
78.45307
  • 78.45307
  • 66.66666
  • 66.66666
  • 62.49830
  • 62.49830
  • 61.17824
  • 50.00000
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.53e3
  • 6.53e3
77.91898
  • 77.91898
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.44e3
  • 7.44e3
74.84664
  • 74.84664
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.49951
  • 73.49951
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.16240
  • 66.16240
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
64.87925
  • 64.87925
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
63.75869
  • 63.75869
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.46553
  • 61.46553
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
59.66066
  • 59.66066
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.04213
  • 59.04213
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.77846
  • 58.77846
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.37738
  • 53.37738
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
51.94305
  • 51.94305
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
51.79558
  • 51.79558
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.54227
  • 44.54227
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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