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D. rerio Gene: tmem57b - ENSDARG00000012741 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012741
Nametmem57b
Descriptiontransmembrane protein 57b [Source:ZFIN;Acc:ZDB-GENE-040426-1188]
OrganismDanio rerio (zebrafish)
Synonym(s)b7zuy4, zgc:63610
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.63e3
  • 1.63e3
  • 1.96e3
94.56
  • 94.56
  • 93.44
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.99e3
  • 1.99e3
93.34
  • 93.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
92.74
  • 92.74
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.58e3
  • 2.58e3
91.37
  • 91.37
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
2.75e3
  • 2.75e3
  • 3.97e3
  • 5.52e3
  • 5.55e3
  • 6.24e3
90.79
  • 90.79
  • 86.71
  • 81.52
  • 81.43
  • 79.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.49e3
  • 3.49e3
88.30
  • 88.30
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.75e3
  • 3.75e3
87.44
  • 87.44
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
  • 9.21e3
86.70
  • 86.70
  • 69.16
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.41e3
  • 4.41e3
  • 6.48e3
85.25
  • 85.25
  • 78.30
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.33
  • 84.33
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.88e3
  • 4.88e3
  • 6.14e3
83.67
  • 83.67
  • 79.46
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.89e3
  • 4.89e3
83.65
  • 83.65
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.12e3
  • 5.12e3
82.85
  • 82.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
81.66
  • 81.66
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.38
  • 81.38
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.47
  • 79.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
78.84
  • 78.84
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.17e3
  • 7.17e3
75.99
  • 75.99
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
  • 9.58e3
75.38
  • 75.38
  • 67.92
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.46e3
  • 7.46e3
75.03
  • 75.03
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
74.77
  • 74.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.19
  • 72.19
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.65
  • 55.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000012741.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000012741.

Cross-references

EnsemblENSDARG00000012741 (tmem57b)
ZFINZDB-GENE-040426-1188 (tmem57b)
EMBLAY845030, BC171392, BX465191
Uniprot/SPTREMBLF1QX82, F1QX82_DANRE
Uniprot/SWISSPROTMACO2_DANRE, Q2TLY1

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