D. rerio Gene: rer1 - ENSDARG00000012747 - Danio rerio (zebrafish)

Gene Information

Ensembl IDENSDARG00000012747
Namerer1
Descriptionretention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
244
  • 244
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.52e3
  • 1.52e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
1.63e3
  • 1.63e3
  • 1.71e3
  • 1.83e3
  • 1.97e3
  • 2.06e3
  • 2.52e3
  • 2.90e3
  • 3.10e3
  • 3.48e3
  • 4.11e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.99e3
  • 1.99e3
  • 2.01e3
  • 2.09e3
  • 2.39e3
  • 4.31e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
  • 4.89e3
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.40e3
  • 2.40e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
  • 2.78e3
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.60e3
  • 2.60e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
2.62e3
  • 2.62e3
  • 2.62e3
  • 2.79e3
  • 2.94e3
  • 3.21e3
  • 3.39e3
  • 3.93e3
  • 4.39e3
  • 4.39e3
  • 4.43e3
  • 4.52e3
  • 4.70e3
  • 4.85e3
  • 6.31e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.68e3
  • 2.68e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.75e3
  • 2.75e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.80e3
  • 2.80e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
  • 3.66e3
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
  • 4.38e3
  • 7.85e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.37e3
  • 3.37e3
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.74e3
  • 3.74e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.91e3
  • 3.91e3
  • 3.94e3
  • 4.11e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
4.03e3
  • 4.03e3
  • 4.04e3
  • 5.32e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.91e3
  • 5.91e3
AEIR
  • AEIR
UBERON:2000940posterior lateral line neuromast
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
9.86e3
  • 9.86e3
  • 1.23e4
AEIR
  • AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000024Segmentation:5-9 somites
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000035Larval:Protruding-mouth
1.27e4
  • 1.27e4
AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
AEIR
  • AEIR
UBERON:0001707nasal cavity
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:2001472anterior lateral line neuromast
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data: