D. rerio Gene: nop56 - ENSDARG00000012820 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012820
Namenop56
DescriptionNOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
OrganismDanio rerio (zebrafish)
Synonym(s)nol5a, nop56

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
356
  • 356
  • 496
  • 578
  • 962
  • 1.03e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
572
  • 572
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
576
  • 576
  • 1.31e4
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
748
  • 748
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
851
  • 851
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
952
  • 952
  • 1.57e3
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
998
  • 998
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.16e3
  • 1.16e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
  • 1.42e4
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.49e3
  • 1.49e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.67e3
  • 1.67e3
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.15e3
  • 3.15e3
  • 1.44e4
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000068embryo stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000049segmentation
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
5.75e3
  • 5.75e3
  • 6.06e3
  • 8.67e3
  • 1.13e4
  • 1.16e4
  • 1.24e4
  • 1.37e4
  • 1.42e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.29e4
  • 1.29e4
  • 1.29e4
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAY648814, CT027620
EnsemblENSDARG00000012820 (nop56)
Uniprot/SPTREMBLE7EZW9, E7EZW9_DANRE, F1QD17, F1QD17_DANRE, G1K2N3, G1K2N3_DANRE, Q6DRE5, Q6DRE5_DANRE
ZFINZDB-GENE-040109-1 (nop56)

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