D. rerio Gene: tmprss4b - ENSDARG00000012860 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012860
Nametmprss4b
Descriptiontransmembrane protease, serine 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-139a5.13, si:ch211-139a5.6, wu:fi21e09, wu:fk84e06
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
267
  • 267
99.11
  • 99.11
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
510
  • 510
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.45e3
  • 1.45e3
  • 9.82e3
  • 1.52e4
  • 1.62e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
95.16
  • 95.16
  • 67.13
  • 49.03
  • 45.70
  • 40.56
  • 40.18
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.13
  • 95.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.51e3
  • 1.51e3
94.94
  • 94.94
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.39
  • 94.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.11
  • 93.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
92.53
  • 92.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.39e3
  • 2.39e3
91.99
  • 91.99
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.58e3
  • 2.58e3
91.37
  • 91.37
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
3.26e3
  • 3.26e3
  • 4.57e3
  • 5.09e3
  • 5.10e3
  • 6.00e3
89.08
  • 89.08
  • 84.71
  • 82.96
  • 82.93
  • 79.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
85.24
  • 85.24
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
5.70e3
  • 5.70e3
  • 7.81e3
  • 1.19e4
  • 1.28e4
  • 1.46e4
80.93
  • 80.93
  • 73.85
  • 60.13
  • 57.18
  • 51.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.76e3
  • 6.76e3
77.37
  • 77.37
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.25e3
  • 7.25e3
75.73
  • 75.73
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.53e3
  • 7.53e3
74.78
  • 74.78
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.22e4
  • 1.22e4
  • 1.63e4
59.00
  • 59.00
  • 45.43
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.53e4
  • 1.53e4
  • 1.90e4
  • 1.97e4
  • 2.02e4
  • 2.03e4
48.62
  • 48.62
  • 36.54
  • 34.10
  • 32.23
  • 31.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.84
  • 47.84
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.74e4
  • 1.74e4
41.86
  • 41.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.47
  • 41.47
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.28
  • 40.28
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.82e4
  • 1.82e4
  • 1.84e4
38.96
  • 38.96
  • 38.47
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.94
  • 30.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000012860.

Cross-references

EnsemblENSDARG00000012860 (tmprss4b)
ZFINZDB-GENE-030131-5862 (tmprss4b)
EMBLAL935065, BX465852
Uniprot/SPTREMBLA2BGB9, A2BGB9_DANRE, A5PF54, A5PF54_DANRE

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