D. rerio Gene: slc4a1a - ENSDARG00000012881 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012881
Nameslc4a1a
Descriptionsolute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
OrganismDanio rerio (zebrafish)
Synonym(s)ae1, ae1/band 3, band3, erythroid anion exchanger 1, ret, retsina, si:dz180g5.1, slc4a1, slc4a1gn, zae1a, zgc:111889, zgc:152771

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
359
  • 359
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
681
  • 681
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
697
  • 697
AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.06e3
  • 1.06e3
  • 1.06e3
  • 1.23e3
  • 1.85e3
  • 2.47e3
  • 8.46e3
  • 9.25e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.42e3
  • 1.42e3
  • 1.63e3
  • 2.06e3
  • 3.38e3
  • 8.39e3
  • 9.35e3
  • 1.45e4
  • 1.46e4
  • 1.47e4
  • 1.55e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.51e3
  • 1.51e3
  • 1.52e3
  • 1.78e3
  • 2.27e3
  • 3.53e3
  • 4.24e3
  • 4.49e3
  • 1.77e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.15e3
  • 5.15e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.64e3
  • 6.64e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.76e3
  • 6.76e3
  • 1.85e4
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
AEIR
  • AEIR
CL:0000562nucleate erythrocyte
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
7.40e3
  • 7.40e3
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
  • 1.39e4
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.17e3
  • 8.17e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.66e3
  • 8.66e3
AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000028Segmentation:26+ somites
8.88e3
  • 8.88e3
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
9.18e3
  • 9.18e3
  • 1.13e4
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
9.33e3
  • 9.33e3
  • 1.04e4
  • 1.07e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.01e4
  • 1.01e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.04e4
  • 1.04e4
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
AEIR
  • AEIR
UBERON:0007812post-anal tail
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.11e4
  • 1.11e4
  • 1.18e4
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
  • 1.27e4
AEIR
  • AEIR
  • AEIR
UBERON:0003061blood island
  • ZFS:0000029Pharyngula:Prim-5
1.23e4
  • 1.23e4
AEIR
  • AEIR
CL:0000762nucleated thrombocyte
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
AEIR
  • AEIR
ZFA:0005040posterior lateral mesoderm (Danio)
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
CL:0000764erythroid lineage cell
  • ZFS:0000027Segmentation:20-25 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAF350072, BX088544
EnsemblENSDARG00000012881 (slc4a1a)
Uniprot/SPTREMBLF1RAE7, F1RAE7_DANRE, Q7ZZJ7, Q7ZZJ7_DANRE
ZFINZDB-GENE-010525-1 (slc4a1a)

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