D. rerio Gene: mat2b - ENSDARG00000012932 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000012932
Namemat2b
Descriptionmethionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
OrganismDanio rerio (zebrafish)
Synonym(s)fc55d01, wu:fb48h02, wu:fc55d01, zgc:110308

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
988
  • 988
  • 5.76e3
  • 8.59e3
96.66240
  • 96.66240
  • 80.52921
  • 70.96062
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
1.33e3
  • 1.33e3
  • 1.52e3
  • 4.24e3
95.52336
  • 95.52336
  • 94.85059
  • 85.68114
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
91.65450
  • 91.65450
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
  • 4.10e3
90.74312
  • 90.74312
  • 86.15923
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
90.65114
  • 90.65114
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
89.99767
  • 89.99767
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
89.01006
  • 89.01006
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.30e3
  • 3.30e3
88.85066
  • 88.85066
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.48e3
  • 3.48e3
88.23788
  • 88.23788
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.64e3
  • 3.64e3
87.70385
  • 87.70385
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.05783
  • 86.05783
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
4.13e3
  • 4.13e3
  • 4.73e3
  • 4.87e3
  • 5.16e3
  • 5.56e3
  • 5.67e3
  • 5.86e3
  • 6.59e3
  • 8.59e3
  • 1.01e4
86.05421
  • 86.05421
  • 84.03278
  • 83.52965
  • 82.57313
  • 81.21363
  • 80.84457
  • 80.19262
  • 77.74191
  • 70.96584
  • 65.92808
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.34467
  • 85.34467
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.43e3
  • 4.43e3
85.04654
  • 85.04654
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.47e3
  • 4.47e3
  • 7.70e3
84.88392
  • 84.88392
  • 73.98311
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.59e3
  • 4.59e3
84.49008
  • 84.49008
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.28675
  • 84.28675
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.24957
  • 84.24957
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.87e3
  • 4.87e3
  • 5.08e3
  • 5.62e3
  • 7.45e3
  • 8.53e3
83.55922
  • 83.55922
  • 82.84850
  • 81.00367
  • 74.81230
  • 71.16469
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.15581
  • 83.15581
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.10e3
  • 5.10e3
82.76217
  • 82.76217
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.12e3
  • 5.12e3
82.69221
  • 82.69221
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.23e3
  • 5.23e3
82.32057
  • 82.32057
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.34e3
  • 6.34e3
  • 6.34e3
  • 6.34e3
  • 6.58e3
  • 6.83e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.89e3
  • 8.46e3
  • 8.46e3
  • 8.63e3
  • 8.71e3
  • 8.71e3
  • 8.88e3
  • 8.88e3
  • 9.05e3
  • 9.05e3
  • 9.05e3
  • 9.62e3
  • 9.87e3
  • 9.87e3
78.56975
  • 78.56975
  • 78.56975
  • 78.56975
  • 77.77439
  • 76.91633
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 73.32320
  • 71.42518
  • 71.41166
  • 70.82487
  • 70.57472
  • 70.57472
  • 69.98817
  • 69.98310
  • 69.42923
  • 69.42923
  • 69.42923
  • 67.48142
  • 66.65990
  • 66.65314
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.58437
  • 77.58437
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
6.82e3
  • 6.82e3
  • 7.13e3
  • 7.26e3
  • 7.33e3
  • 7.44e3
  • 7.94e3
  • 7.96e3
  • 8.31e3
  • 8.45e3
  • 8.52e3
  • 8.70e3
  • 8.82e3
  • 8.96e3
  • 9.23e3
76.94419
  • 76.94419
  • 75.89504
  • 75.48009
  • 75.21815
  • 74.86849
  • 73.16283
  • 73.10832
  • 71.93236
  • 71.44036
  • 71.20886
  • 70.60847
  • 70.18905
  • 69.71771
  • 68.80075
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.96e3
  • 6.96e3
76.47346
  • 76.47346
AEIR
  • AEIR
UBERON:0003080anterior neural tube
  • ZFS:0000029Pharyngula:Prim-5
7.40e3
  • 7.40e3
75.00167
  • 75.00167
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
7.89e3
  • 7.89e3
  • 7.99e3
  • 8.06e3
73.34653
  • 73.34653
  • 72.99468
  • 72.75484
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.92e3
  • 7.92e3
  • 9.52e3
73.23004
  • 73.23004
  • 67.82657
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.33e4
  • 1.33e4
55.16372
  • 55.16372
AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
54.98815
  • 54.98815
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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