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D. rerio Gene: ubiad1 - ENSDARG00000013009 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013009
Nameubiad1
DescriptionUbiA prenyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3205]
OrganismDanio rerio (zebrafish)
Synonym(s)bar, barolo, reh, unm t31131, unm_t31131, wu:fc30e12
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
692
  • 692
  • 2.18e3
  • 3.90e3
  • 8.95e3
97.68
  • 97.68
  • 92.69
  • 86.96
  • 70.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.20e3
  • 3.20e3
  • 3.27e3
  • 6.91e3
  • 8.41e3
  • 9.52e3
89.29
  • 89.29
  • 89.06
  • 76.87
  • 71.84
  • 68.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.60e3
  • 3.60e3
87.96
  • 87.96
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
  • 5.76e3
86.60
  • 86.60
  • 80.73
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.23e3
  • 4.23e3
85.82
  • 85.82
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
  • 8.75e3
85.42
  • 85.42
  • 70.70
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.49
  • 84.49
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
4.80e3
  • 4.80e3
  • 5.92e3
  • 5.95e3
  • 5.96e3
  • 6.14e3
  • 6.15e3
83.92
  • 83.92
  • 80.19
  • 80.09
  • 80.05
  • 79.44
  • 79.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
5.19e3
  • 5.19e3
  • 5.57e3
  • 5.61e3
  • 5.91e3
  • 6.62e3
  • 7.03e3
  • 7.30e3
  • 7.37e3
  • 8.05e3
  • 8.43e3
82.62
  • 82.62
  • 81.36
  • 81.21
  • 80.22
  • 77.85
  • 76.48
  • 75.55
  • 75.33
  • 73.03
  • 71.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.53
  • 81.53
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.85e3
  • 5.85e3
80.42
  • 80.42
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.97e3
  • 5.97e3
80.01
  • 80.01
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.09e3
  • 6.09e3
  • 6.39e3
  • 6.88e3
  • 7.12e3
  • 7.12e3
  • 7.31e3
  • 7.37e3
  • 7.79e3
  • 7.86e3
  • 8.14e3
  • 8.63e3
  • 8.70e3
  • 8.87e3
  • 9.15e3
  • 1.44e4
  • 1.46e4
  • 1.50e4
79.61
  • 79.61
  • 78.62
  • 76.98
  • 76.18
  • 76.17
  • 75.54
  • 75.32
  • 73.93
  • 73.67
  • 72.73
  • 71.10
  • 70.88
  • 70.30
  • 69.37
  • 51.82
  • 51.12
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.92
  • 78.92
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.47e3
  • 6.47e3
  • 6.61e3
78.35
  • 78.35
  • 77.87
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
6.62e3
  • 6.62e3
  • 7.51e3
  • 8.33e3
77.82
  • 77.82
  • 74.87
  • 72.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.15
  • 77.15
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.93e3
  • 6.93e3
  • 7.04e3
  • 1.42e4
76.81
  • 76.81
  • 76.41
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.20e3
  • 7.20e3
75.91
  • 75.91
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.48e3
  • 7.48e3
74.97
  • 74.97
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.62e3
  • 7.62e3
74.50
  • 74.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.67e3
  • 7.67e3
74.31
  • 74.31
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.85e3
  • 7.85e3
73.73
  • 73.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.47
  • 73.47
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.04e3
  • 8.04e3
73.07
  • 73.07
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.72
  • 72.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.23
  • 72.23
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.38e3
  • 8.38e3
71.93
  • 71.93
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.31
  • 70.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSDARG00000013009.

Cross-references

EnsemblENSDARG00000013009 (ubiad1)
ZFINZDB-GENE-030131-3205 (ubiad1)
EMBLCABZ01068151
Uniprot/SWISSPROTE7FB98, UBIA1_DANRE

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