D. rerio Gene: ints6 - ENSDARG00000013025 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013025
Nameints6
Descriptionintegrator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-070906-1]
OrganismDanio rerio (zebrafish)
Synonym(s)ddx26a
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
4.69e3
  • 4.69e3
  • 6.77e3
84.30
  • 84.30
  • 77.34
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.30
  • 79.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
6.18e3
  • 6.18e3
  • 7.68e3
79.29
  • 79.29
  • 74.29
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.60e3
  • 6.60e3
77.89
  • 77.89
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000015Blastula:Dome
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
6.79e3
  • 6.79e3
  • 7.47e3
  • 1.47e4
  • 1.47e4
  • 1.49e4
77.27
  • 77.27
  • 74.99
  • 50.90
  • 50.68
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.86
  • 76.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.99e3
  • 6.99e3
76.59
  • 76.59
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.45
  • 74.45
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.70e3
  • 7.70e3
  • 8.98e3
  • 9.37e3
  • 1.15e4
  • 1.35e4
74.21
  • 74.21
  • 69.95
  • 68.64
  • 61.48
  • 54.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.95e3
  • 7.95e3
  • 1.26e4
73.37
  • 73.37
  • 57.72
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.03
  • 73.03
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.35e3
  • 8.35e3
72.04
  • 72.04
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
70.69
  • 70.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.99e3
  • 8.99e3
69.91
  • 69.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.36
  • 68.36
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.39
  • 67.39
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.49
  • 66.49
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.05e4
  • 1.05e4
  • 1.13e4
64.87
  • 64.87
  • 62.31
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.77
  • 63.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.68
  • 60.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.90
  • 59.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.53
  • 56.53
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
  • 1.60e4
52.87
  • 52.87
  • 46.51
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000013025.

Cross-references

EnsemblENSDARG00000013025 (ints6)
ZFINZDB-GENE-070906-1 (ints6)
EMBLCR533429, KF700696
Uniprot/SPTREMBLB0UYL7, B0UYL7_DANRE

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