Gene: abcc12 - ENSDARG00000013050 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000013050
Name	abcc12
Description	ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
Organism	Danio rerio (zebrafish)
Synonym(s)	mrp9
Orthologs(s)	16 orthologs
Paralog(s)	33 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	838 838	97.20 97.20	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	2.06e3 2.06e3	93.12 93.12	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	6.69e3 6.69e3	77.59 77.59	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	7.82e3 7.82e3	73.83 73.83	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	8.54e3 8.54e3	71.41 71.41	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	9.54e3 9.54e3	68.05 68.05	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.06e4 1.06e4	64.60 64.60	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.13e4 1.13e4	62.16 62.16	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.17e4 1.17e4 2.10e4	60.81 60.81 29.66	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.25e4 1.25e4	58.02 58.02	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.34e4 1.34e4 1.62e4	55.18 55.18 45.77	AEIR AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.38e4 1.38e4	53.68 53.68	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.50e4 1.50e4	49.88 49.88	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.53e4 1.53e4	48.90 48.90	AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage	1.53e4 1.53e4 2.11e4 2.15e4	48.76 48.76 29.44 28.15	AEIR AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.55e4 1.55e4	48.14 48.14	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.63e4 1.63e4	45.51 45.51	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.94e4 1.94e4	35.11 35.11	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.95e4 1.95e4	34.56 34.56	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	2.01e4 2.01e4	32.55 32.55	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Anolis carolinensis (green anole)	16 genes ENSG00000140798 ABCC12 ENSMUSG00000036872 Abcc12 ENSPTRG00000008091 ABCC12 ENSGGOG00000004009 ABCC12 ENSMMUG00000002201 ABCC12 ENSRNOG00000015666 Abcc12 ENSBTAG00000044191 ABCC12 ENSSSCG00000022813 ABCC12 ENSECAG00000019541 ABCC12 ENSOCUG00000002029 ABCC12 ENSCAFG00000010194 ABCC12 ENSFCAG00000005279 ABCC12 ENSCPOG00000006873 ABCC12 ENSEEUG00000005803 ABCC12 ENSOANG00000014850 ABCC12 ENSACAG00000014129 ABCC12	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000013050.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	2 genes ENSDARG00000061233 abcc5 ENSDARG00000076547 si:ch211-221f10.2	Compare expression	[+]
Opisthokonta	11 genes ENSDARG00000014031 abcc2 ENSDARG00000015985 abcc9 ENSDARG00000016750 abcc6a ENSDARG00000051879 abcc8 ENSDARG00000058953 abcc4 ENSDARG00000061233 abcc5 ENSDARG00000076547 si:ch211-221f10.2 ENSDARG00000077007 abcc8b ENSDARG00000094901 abcc6b.2 ENSDARG00000096662 abcc3 ENSDARG00000104719 abcc1	Compare expression	[+]
Eukaryota	33 genes ENSDARG00000010936 abcb4 ENSDARG00000011573 abcb11a ENSDARG00000014031 abcc2 ENSDARG00000015985 abcc9 ENSDARG00000016750 abcc6a ENSDARG00000016818 abcg2d ENSDARG00000021787 abcb5 ENSDARG00000031795 abcf1 ENSDARG00000038785 abcf2a ENSDARG00000051879 abcc8 ENSDARG00000052331 ABCF2 (1 to many) ENSDARG00000056200 abcb9 ENSDARG00000056672 abcb8 ENSDARG00000058953 abcc4 ENSDARG00000061047 abcg4a ENSDARG00000061233 abcc5 ENSDARG00000061591 abcb10 ENSDARG00000062795 abcb7 ENSDARG00000063059 abcg8 ENSDARG00000063078 abcg5 ENSDARG00000063297 abcb6a ENSDARG00000063475 abcg1 ENSDARG00000070078 abcb11b ENSDARG00000074254 abcb6b ENSDARG00000076547 si:ch211-221f10.2 ENSDARG00000077007 abcc8b ENSDARG00000077988 abcc10 ENSDARG00000078068 abcg4b ENSDARG00000079361 abcg2b ENSDARG00000094901 abcc6b.2 ENSDARG00000096662 abcc3 ENSDARG00000100075 abcg2a ENSDARG00000104719 abcc1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000013050.

Cross-references

Ensembl	ENSDARG00000013050 (abcc12)
ZFIN	ZDB-GENE-050517-25 (abcc12)
EMBL	BX323060, BX323797
Uniprot/SPTREMBL	E7F3T8, E7F3T8_DANRE