D. rerio Gene: gclc - ENSDARG00000013095 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013095
Namegclc
Descriptionglutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
OrganismDanio rerio (zebrafish)
Synonym(s)cb1049, fe36e11, wu:fe36e11
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.34e3
  • 1.34e3
  • 1.71e3
  • 2.68e3
  • 3.95e3
  • 4.31e3
95.51
  • 95.51
  • 94.29
  • 91.04
  • 86.79
  • 85.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.85e3
  • 1.85e3
93.82
  • 93.82
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
  • 2.67e3
  • 4.83e3
  • 5.12e3
  • 5.57e3
  • 5.79e3
  • 5.80e3
  • 6.30e3
  • 6.70e3
  • 6.78e3
  • 6.86e3
  • 6.96e3
  • 7.14e3
  • 7.77e3
  • 9.34e3
  • 1.05e4
  • 1.37e4
  • 1.39e4
93.27
  • 93.27
  • 91.07
  • 83.84
  • 82.87
  • 81.36
  • 80.63
  • 80.58
  • 78.91
  • 77.55
  • 77.29
  • 77.03
  • 76.69
  • 76.10
  • 74.00
  • 68.74
  • 64.69
  • 54.25
  • 53.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
2.32e3
  • 2.32e3
  • 2.65e3
  • 5.07e3
  • 6.14e3
  • 7.45e3
  • 7.92e3
92.22
  • 92.22
  • 91.13
  • 83.03
  • 79.43
  • 75.04
  • 73.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.54e3
  • 2.54e3
91.49
  • 91.49
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.51
  • 89.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.64
  • 88.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
3.46e3
  • 3.46e3
  • 5.92e3
  • 1.49e4
88.43
  • 88.43
  • 80.17
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.59e3
  • 3.59e3
87.97
  • 87.97
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.67e3
  • 3.67e3
87.72
  • 87.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.69e3
  • 3.69e3
  • 4.98e3
87.65
  • 87.65
  • 83.34
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.89e3
  • 3.89e3
86.99
  • 86.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.96
  • 86.96
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
  • 6.20e3
86.77
  • 86.77
  • 79.23
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.97e3
  • 3.97e3
86.69
  • 86.69
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
4.00e3
  • 4.00e3
  • 4.44e3
  • 4.46e3
  • 4.80e3
  • 4.93e3
  • 5.21e3
  • 5.30e3
  • 5.69e3
  • 5.89e3
  • 7.60e3
86.59
  • 86.59
  • 85.14
  • 85.06
  • 83.93
  • 83.50
  • 82.56
  • 82.26
  • 80.94
  • 80.29
  • 74.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.02e3
  • 4.02e3
86.55
  • 86.55
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.47
  • 86.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.39e3
  • 4.39e3
85.32
  • 85.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
4.39e3
  • 4.39e3
  • 1.31e4
  • 1.35e4
85.30
  • 85.30
  • 56.23
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.43e3
  • 4.43e3
  • 4.59e3
  • 5.06e3
85.15
  • 85.15
  • 84.64
  • 83.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.94
  • 84.94
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.63e3
  • 4.63e3
  • 5.90e3
84.49
  • 84.49
  • 80.24
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.80
  • 83.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.21e3
  • 5.21e3
82.56
  • 82.56
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
5.31e3
  • 5.31e3
  • 6.85e3
  • 7.62e3
  • 1.05e4
82.22
  • 82.22
  • 77.07
  • 74.50
  • 64.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.55e3
  • 5.55e3
81.40
  • 81.40
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.85e3
  • 5.85e3
  • 6.94e3
80.41
  • 80.41
  • 76.77
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.94
  • 77.94
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.93
  • 77.93
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.24
  • 77.24
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.61e3
  • 7.61e3
74.51
  • 74.51
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.38e3
  • 8.38e3
71.95
  • 71.95
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.67e3
  • 9.67e3
  • 9.96e3
  • 1.05e4
67.63
  • 67.63
  • 66.65
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
  • 1.10e4
  • 1.34e4
  • 1.34e4
64.27
  • 64.27
  • 63.32
  • 55.24
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
1.16e4
  • 1.16e4
  • 1.34e4
  • 1.34e4
  • 1.40e4
  • 1.40e4
  • 1.42e4
61.09
  • 61.09
  • 54.97
  • 54.97
  • 53.10
  • 53.10
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.21e4
  • 1.21e4
  • 1.33e4
  • 1.40e4
  • 1.42e4
59.50
  • 59.50
  • 55.53
  • 53.10
  • 52.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.31e4
  • 1.31e4
  • 1.39e4
56.23
  • 56.23
  • 53.55
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.34e4
  • 1.34e4
  • 1.35e4
  • 1.41e4
55.24
  • 55.24
  • 54.73
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.40e4
  • 1.40e4
  • 1.41e4
53.10
  • 53.10
  • 52.92
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000013095.

Cross-references

EnsemblENSDARG00000013095 (gclc)
ZFINZDB-GENE-030131-5056 (gclc)
EMBLBC068331, BC154235, CR376766
Uniprot/SPTREMBLA8KBT3, A8KBT3_DANRE, Q6NV35, Q6NV35_DANRE

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