D. rerio Gene: dlx1a - ENSDARG00000013125 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013125
Namedlx1a
Descriptiondistal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
OrganismDanio rerio (zebrafish)
Synonym(s)dlx1, q567k7, zgc:111939

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.69e3
  • 4.69e3
AEIR
  • AEIR
UBERON:0004744articular/anguloarticular
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
4.93e3
  • 4.93e3
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
  • 9.86e3
  • 1.53e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
6.79e3
  • 6.79e3
  • 7.40e3
  • 7.79e3
  • 1.01e4
  • 1.07e4
  • 1.09e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
6.87e3
  • 6.87e3
  • 7.89e3
  • 8.17e3
  • 8.70e3
  • 8.77e3
  • 8.85e3
  • 1.43e4
  • 1.46e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002397maxilla
  • ZFS:0000038Larval:Day 6
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:2000422retroarticular
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
7.40e3
  • 7.40e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:2000692symplectic
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
7.40e3
  • 7.40e3
  • 9.86e3
  • 9.86e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001280branchiostegal ray 3
  • ZFS:0000036Larval:Day 4
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0001900ventral thalamus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
7.40e3
  • 7.40e3
  • 8.46e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.40e3
  • 7.40e3
  • 8.07e3
  • 8.22e3
  • 8.46e3
  • 1.08e4
  • 1.11e4
  • 1.15e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000026Segmentation:14-19 somites
7.89e3
  • 7.89e3
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.97e3
  • 7.97e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 9.42e3
  • 1.04e4
  • 1.04e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
8.64e3
  • 8.64e3
  • 9.42e3
  • 9.87e3
  • 1.03e4
  • 1.09e4
  • 1.09e4
  • 1.13e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
8.71e3
  • 8.71e3
  • 9.11e3
  • 9.51e3
  • 9.51e3
  • 9.87e3
  • 1.02e4
  • 1.02e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004752palatoquadrate cartilage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
9.86e3
  • 9.86e3
  • 9.86e3
  • 1.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0011606hyomandibular bone
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
9.86e3
  • 9.86e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.05e4
  • 1.05e4
  • 1.17e4
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.12e4
  • 1.12e4
  • 1.19e4
  • 1.30e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
1.17e4
  • 1.17e4
  • 1.18e4
  • 1.28e4
  • 1.31e4
  • 1.41e4
  • 1.49e4
  • 1.56e4
  • 1.67e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
  • 1.36e4
AEIR
  • AEIR
  • AEIR
UBERON:0001928preoptic area
  • ZFS:0000033Hatching:Long-pec
1.18e4
  • 1.18e4
AEIR
  • AEIR
UBERON:2001281branchiostegal ray 2
  • ZFS:0000037Larval:Day 5
  • ZFS:0000038Larval:Day 6
1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0000204ventral part of telencephalon
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0004742dentary
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:2000250opercle
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008896post-hyoid pharyngeal arch
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC093139, U67842
EnsemblENSDARG00000013125 (dlx1a)
Uniprot/SWISSPROTDLX1A_DANRE, Q98875
ZFINZDB-GENE-990415-48 (dlx1a)

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