D. rerio Gene: atp1b1a - ENSDARG00000013144 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013144
Nameatp1b1a
DescriptionATPase, Na+/K+ transporting, beta 1a polypeptide [Source:ZFIN;Acc:ZDB-GENE-001127-3]
OrganismDanio rerio (zebrafish)
Synonym(s)cb132, etid58837.6, fd56c08, fj91b11, wu:fd56c08, wu:fj91b11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
145
  • 145
99.52
  • 99.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
258
  • 258
  • 280
  • 1.03e4
  • 1.10e4
  • 1.18e4
99.14
  • 99.14
  • 99.07
  • 65.36
  • 63.32
  • 60.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
303
  • 303
98.99
  • 98.99
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
324
  • 324
98.92
  • 98.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
436
  • 436
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
454
  • 454
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
495
  • 495
98.35
  • 98.35
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
503
  • 503
98.32
  • 98.32
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
514
  • 514
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000109gastrula stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
515
  • 515
  • 604
  • 763
  • 903
  • 1.15e3
  • 1.23e3
  • 1.24e3
  • 1.26e3
  • 1.35e3
  • 1.49e3
  • 1.62e3
  • 1.74e3
  • 2.12e3
  • 1.16e4
  • 1.19e4
  • 1.30e4
  • 1.35e4
  • 1.35e4
98.28
  • 98.28
  • 97.98
  • 97.45
  • 96.98
  • 96.16
  • 95.89
  • 95.87
  • 95.80
  • 95.49
  • 95.02
  • 94.59
  • 94.18
  • 92.90
  • 61.10
  • 60.00
  • 56.36
  • 54.83
  • 54.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
557
  • 557
  • 1.11e3
98.14
  • 98.14
  • 96.28
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
568
  • 568
98.10
  • 98.10
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
573
  • 573
  • 802
  • 941
98.08
  • 98.08
  • 97.32
  • 96.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
602
  • 602
  • 878
  • 1.04e3
  • 1.12e3
  • 1.34e3
  • 1.46e3
  • 1.46e3
  • 1.55e3
  • 1.91e3
  • 2.01e3
97.99
  • 97.99
  • 97.06
  • 96.53
  • 96.24
  • 95.53
  • 95.11
  • 95.11
  • 94.81
  • 93.62
  • 93.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
656
  • 656
  • 904
  • 942
  • 1.01e3
  • 1.10e3
  • 1.37e3
97.81
  • 97.81
  • 96.97
  • 96.85
  • 96.63
  • 96.30
  • 95.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
745
  • 745
  • 1.03e4
  • 1.14e4
97.51
  • 97.51
  • 65.61
  • 61.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
868
  • 868
97.10
  • 97.10
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
986
  • 986
  • 2.11e3
96.70
  • 96.70
  • 92.93
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.35
  • 96.35
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
96.22
  • 96.22
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.43e3
  • 1.43e3
95.20
  • 95.20
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.49e3
  • 1.49e3
  • 4.87e3
  • 5.44e3
  • 7.29e3
  • 1.12e4
95.02
  • 95.02
  • 83.69
  • 81.79
  • 75.59
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.61e3
  • 1.61e3
  • 1.89e3
  • 1.46e4
94.63
  • 94.63
  • 93.67
  • 50.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.90e3
  • 1.90e3
93.65
  • 93.65
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.90e3
  • 1.90e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.96e3
  • 1.96e3
  • 2.47e3
  • 1.49e4
93.43
  • 93.43
  • 91.72
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
2.85e3
  • 2.85e3
  • 1.05e4
  • 1.05e4
  • 1.12e4
  • 1.24e4
90.48
  • 90.48
  • 64.98
  • 64.98
  • 62.47
  • 58.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
4.27e3
  • 4.27e3
  • 1.04e4
  • 1.10e4
  • 1.12e4
  • 1.14e4
  • 1.15e4
85.71
  • 85.71
  • 65.19
  • 63.14
  • 62.48
  • 61.88
  • 61.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
4.98e3
  • 4.98e3
  • 7.47e3
  • 8.96e3
  • 9.34e3
  • 1.05e4
  • 1.05e4
  • 1.10e4
  • 1.12e4
83.33
  • 83.33
  • 74.99
  • 69.98
  • 68.74
  • 64.98
  • 64.69
  • 63.14
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
5.29e3
  • 5.29e3
  • 1.28e4
  • 1.29e4
82.28
  • 82.28
  • 57.12
  • 56.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003064intermediate mesoderm
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
9.44e3
  • 9.44e3
68.40
  • 68.40
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.67e3
  • 9.67e3
  • 9.67e3
67.63
  • 67.63
  • 67.63
AEIR
  • AEIR
  • AEIR
UBERON:0005068neural rod
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.50e4
63.60
  • 63.60
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0001015musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.10e4
  • 1.10e4
  • 1.12e4
63.32
  • 63.32
  • 62.48
AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.10e4
  • 1.10e4
  • 1.26e4
  • 1.26e4
  • 1.26e4
  • 1.26e4
  • 1.26e4
  • 1.34e4
  • 1.34e4
  • 1.35e4
63.32
  • 63.32
  • 57.68
  • 57.68
  • 57.68
  • 57.68
  • 57.68
  • 55.24
  • 55.24
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.19e4
  • 1.19e4
60.18
  • 60.18
AEIR
  • AEIR
UBERON:0001840semicircular canal
  • ZFS:0000035Larval:Protruding-mouth
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
  • 1.30e4
56.53
  • 56.53
  • 56.48
AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.98
  • 49.98
AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.98
  • 49.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAF286375, BX005104
EnsemblENSDARG00000013144 (atp1b1a)
Uniprot/SPTREMBLQ9DGL3, Q9DGL3_DANRE
ZFINZDB-GENE-001127-3 (atp1b1a)

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