D. rerio Gene: tmem179 - ENSDARG00000013292 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013292
Nametmem179
Descriptiontransmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101058
Orthologs(s)19 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.65e3
  • 1.65e3
  • 1.49e4
94.47
  • 94.47
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
  • 7.49e3
90.04
  • 90.04
  • 74.91
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.84e3
  • 3.84e3
87.15
  • 87.15
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.89e3
  • 4.89e3
  • 6.71e3
83.64
  • 83.64
  • 77.52
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
5.98e3
  • 5.98e3
  • 8.66e3
  • 1.07e4
  • 1.08e4
  • 1.22e4
79.99
  • 79.99
  • 71.01
  • 64.15
  • 63.78
  • 59.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.71
  • 76.71
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
71.43
  • 71.43
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.32e3
  • 9.32e3
68.78
  • 68.78
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.85
  • 62.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.36e4
  • 1.36e4
  • 1.76e4
54.48
  • 54.48
  • 41.06
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.92
  • 52.92
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.45e4
  • 1.45e4
51.30
  • 51.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.59
  • 49.59
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.08
  • 48.08
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.65e4
  • 1.65e4
44.85
  • 44.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.64
  • 39.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.30
  • 38.30
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.45
  • 28.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi13 species13 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSDARG00000013292.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000013292.

Cross-references

EnsemblENSDARG00000013292 (tmem179)
ZFINZDB-GENE-040808-25 (tmem179)
EMBLBC078227, BX255913
Uniprot/SWISSPROTQ6AZD1, T179A_DANRE

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