D. rerio Gene: pygmb - ENSDARG00000013317 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013317
Namepygmb
Descriptionphosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:63642

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
191
  • 191
  • 5.95e3
  • 1.23e4
99.35886
  • 99.35886
  • 79.88742
  • 58.28428
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
393
  • 393
  • 1.20e4
98.67632
  • 98.67632
  • 59.59010
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
487
  • 487
98.35803
  • 98.35803
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
507
  • 507
  • 5.05e3
  • 1.48e4
98.28849
  • 98.28849
  • 82.92633
  • 49.94254
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
803
  • 803
  • 1.24e3
  • 1.77e3
  • 2.00e3
  • 2.04e3
  • 2.37e3
  • 2.81e3
  • 5.03e3
  • 5.40e3
  • 5.43e3
  • 6.08e3
  • 9.02e3
  • 1.23e4
  • 1.46e4
  • 1.48e4
  • 1.49e4
97.29067
  • 97.29067
  • 95.81290
  • 94.00840
  • 93.23130
  • 93.09343
  • 91.98046
  • 90.50253
  • 82.99955
  • 81.73616
  • 81.64781
  • 79.45808
  • 69.51499
  • 58.37166
  • 50.68197
  • 49.91719
  • 49.79382
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
862
  • 862
  • 1.25e3
97.09000
  • 97.09000
  • 95.79538
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.01e3
  • 1.01e3
  • 1.14e3
  • 1.44e3
96.58446
  • 96.58446
  • 96.16592
  • 95.14329
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.44e3
  • 1.44e3
  • 2.07e3
  • 2.26e3
  • 2.28e3
  • 2.59e3
  • 3.91e3
  • 4.33e3
  • 1.00e4
  • 1.02e4
  • 1.26e4
95.13045
  • 95.13045
  • 92.99082
  • 92.34837
  • 92.29040
  • 91.26291
  • 86.78657
  • 85.37242
  • 66.21385
  • 65.65092
  • 57.26879
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
3.17e3
  • 3.17e3
  • 3.50e3
  • 3.74e3
  • 4.41e3
  • 4.95e3
89.29583
  • 89.29583
  • 88.16004
  • 87.37529
  • 85.10432
  • 83.28599
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
88.94766
  • 88.94766
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.40642
  • 87.40642
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
4.23e3
  • 4.23e3
85.70291
  • 85.70291
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.71262
  • 84.71262
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
81.85823
  • 81.85823
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.44054
  • 80.44054
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
  • 1.23e4
71.17951
  • 71.17951
  • 58.51056
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.19e3
  • 9.19e3
68.95084
  • 68.95084
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
65.93453
  • 65.93453
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.28822
  • 65.28822
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.45201
  • 61.45201
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
60.80645
  • 60.80645
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.29e4
  • 1.29e4
56.53065
  • 56.53065
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
53.93059
  • 53.93059
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
52.67847
  • 52.67847
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.64e4
  • 1.64e4
44.61018
  • 44.61018
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.67e4
  • 1.67e4
43.51362
  • 43.51362
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAL928799
EnsemblENSDARG00000013317 (pygmb)
Uniprot/SPTREMBLE7EXT3, E7EXT3_DANRE, E7F8N5, E7F8N5_DANRE, F8W3T2, F8W3T2_DANRE
ZFINZDB-GENE-040426-1206 (pygmb)

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