D. rerio Gene: sycp3 - ENSDARG00000013438 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013438
Namesycp3
Descriptionsynaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
OrganismDanio rerio (zebrafish)
Synonym(s)sycp3l, sycp3l {eco:0000313|embl:aai15344.1,gn eco:0000313|zfin:zdb-gene-040910-2}, zgc:136951

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • ZFS:0000041Larval:Days 21-29
195
  • 195
  • 7.40e3
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000041Larval:Days 21-29
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
  • 7.40e3
  • 1.36e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
AEIR
  • AEIR
CL:0000039germ line cell
  • ZFS:0000040Larval:Days 14-20
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.72e3
  • 9.72e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.51e4
  • 1.51e4
  • 1.74e4
  • 2.19e4
  • 2.29e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC115343, CR385081
EnsemblENSDARG00000013438 (sycp3)
Uniprot/SPTREMBLE9QGA1, E9QGA1_DANRE, Q1RLP7, Q1RLP7_DANRE
ZFINZDB-GENE-040910-2 (sycp3)

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