D. rerio Gene: atp6v1ba - ENSDARG00000013443 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013443
Nameatp6v1ba
DescriptionATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
OrganismDanio rerio (zebrafish)
Synonym(s)cb927, fb52g11, vatb1, wu:fb52g11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
782
  • 782
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
  • ZFS:0000049segmentation
809
  • 809
  • 1.01e3
  • 1.40e3
  • 1.53e3
  • 1.58e3
  • 1.73e3
  • 1.80e3
  • 2.02e3
  • 2.38e3
  • 2.79e3
  • 3.02e3
  • 3.52e3
  • 3.52e3
  • 3.83e3
  • 5.02e3
  • 1.34e4
  • 1.37e4
  • 1.42e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
872
  • 872
  • 1.68e3
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
872
  • 872
  • 1.16e3
  • 2.39e3
  • 8.88e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.14e3
  • 1.14e3
  • 1.24e3
  • 1.31e3
  • 1.34e3
  • 1.37e3
  • 1.79e3
  • 1.92e3
  • 2.12e3
  • 2.45e3
  • 2.86e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.16e3
  • 1.16e3
  • 1.26e3
  • 1.43e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
  • 1.40e3
  • 1.44e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.72e3
  • 1.72e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.02e3
  • 2.02e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.09e3
  • 2.09e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
  • 3.12e3
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.41e3
  • 2.41e3
  • 2.49e3
  • 4.86e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
2.62e3
  • 2.62e3
  • 3.35e3
  • 4.00e3
  • 4.54e3
  • 5.00e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.89e3
  • 2.89e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.18e3
  • 3.18e3
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.22e3
  • 3.22e3
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.22e3
  • 3.22e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.68e3
  • 3.68e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
AEIR
  • AEIR
CL:0000319mucus secreting cell
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
4.93e3
  • 4.93e3
  • 4.93e3
  • 8.22e3
  • 8.88e3
  • 9.11e3
  • 9.11e3
  • 9.11e3
  • 9.25e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000941cranial nerve II
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.92e3
  • 5.92e3
  • 9.86e3
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.40e3
  • 7.40e3
  • 8.88e3
  • 9.87e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
7.89e3
  • 7.89e3
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
7.97e3
  • 7.97e3
  • 8.46e3
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.33e3
  • 8.33e3
  • 8.71e3
  • 9.58e3
  • 9.58e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004535cardiovascular system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.88e3
  • 8.88e3
  • 9.51e3
  • 9.51e3
  • 1.08e4
  • 1.08e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
9.25e3
  • 9.25e3
  • 9.58e3
  • 1.04e4
  • 1.07e4
  • 1.18e4
  • 1.21e4
  • 1.21e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
9.87e3
  • 9.87e3
  • 1.02e4
  • 1.02e4
  • 1.06e4
  • 1.07e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
9.87e3
  • 9.87e3
  • 1.03e4
  • 1.05e4
  • 1.08e4
  • 1.09e4
  • 1.09e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.01e4
  • 1.01e4
  • 1.06e4
  • 1.08e4
  • 1.11e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.05e4
  • 1.07e4
  • 1.09e4
  • 1.09e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.02e4
  • 1.02e4
  • 1.04e4
  • 1.07e4
  • 1.07e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.03e4
  • 1.03e4
  • 1.11e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.03e4
  • 1.03e4
  • 1.04e4
  • 1.04e4
  • 1.06e4
  • 1.06e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.15e4
  • 1.15e4
  • 1.15e4
  • 1.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
  • 1.36e4
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC059455, BC071387, CT574588
EnsemblENSDARG00000013443 (atp6v1ba)
Uniprot/SPTREMBLQ6PC68, Q6PC68_DANRE
ZFINZDB-GENE-030711-3 (atp6v1ba)

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