D. rerio Gene: lpgat1 - ENSDARG00000013542 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013542
Namelpgat1
Descriptionlysophosphatidylglycerol acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2906]
OrganismDanio rerio (zebrafish)
Synonym(s)fc21c12, fj66b10, si:dkey-30h14.2, wu:fc21c12, wu:fj66b10, zgc:112278

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
94.80336
  • 94.80336
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.72e3
  • 1.72e3
  • 3.51e3
  • 3.90e3
94.18199
  • 94.18199
  • 88.14772
  • 86.83488
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.48e3
  • 2.48e3
91.62567
  • 91.62567
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.39472
  • 91.39472
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.70e3
  • 2.70e3
90.87857
  • 90.87857
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.59e3
  • 3.59e3
87.87685
  • 87.87685
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
3.76e3
  • 3.76e3
  • 5.04e3
  • 5.31e3
  • 5.73e3
  • 5.99e3
87.28640
  • 87.28640
  • 82.95973
  • 82.04489
  • 80.64175
  • 79.75938
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.86e3
  • 3.86e3
  • 7.77e3
86.94291
  • 86.94291
  • 73.72660
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.05e3
  • 4.05e3
  • 5.38e3
86.30456
  • 86.30456
  • 81.82536
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.26850
  • 86.26850
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.11e3
  • 4.11e3
  • 4.15e3
  • 4.24e3
  • 4.48e3
  • 4.53e3
  • 4.82e3
  • 4.87e3
  • 5.03e3
  • 5.05e3
  • 5.22e3
  • 5.53e3
  • 5.87e3
  • 6.04e3
  • 6.21e3
  • 1.46e4
  • 1.47e4
  • 1.48e4
86.11884
  • 86.11884
  • 85.98142
  • 85.68431
  • 84.86514
  • 84.67547
  • 83.71050
  • 83.52959
  • 83.01297
  • 82.92303
  • 82.37366
  • 81.32065
  • 80.16299
  • 79.58467
  • 79.00402
  • 50.60365
  • 50.24552
  • 49.91719
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.30411
  • 85.30411
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.46e3
  • 4.46e3
  • 7.60e3
  • 7.72e3
84.92867
  • 84.92867
  • 74.32410
  • 73.91898
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
4.64e3
  • 4.64e3
  • 5.77e3
  • 6.10e3
84.31028
  • 84.31028
  • 80.49509
  • 79.38827
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.07382
  • 84.07382
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
83.84060
  • 83.84060
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
4.81e3
  • 4.81e3
  • 5.13e3
  • 5.25e3
  • 5.48e3
  • 5.79e3
  • 6.44e3
  • 6.71e3
  • 7.11e3
  • 7.29e3
  • 7.54e3
83.75273
  • 83.75273
  • 82.66050
  • 82.25745
  • 81.48142
  • 80.42455
  • 78.22098
  • 77.32800
  • 75.96901
  • 75.35062
  • 74.52308
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.88e3
  • 4.88e3
83.52289
  • 83.52289
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.56637
  • 82.56637
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.18e3
  • 5.18e3
82.50215
  • 82.50215
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.41e3
  • 5.41e3
81.73410
  • 81.73410
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.53842
  • 80.53842
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.33868
  • 77.33868
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.97e3
  • 6.97e3
  • 7.07e3
76.42859
  • 76.42859
  • 76.09578
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
74.16997
  • 74.16997
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.77e3
  • 7.77e3
73.73420
  • 73.73420
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.10214
  • 72.10214
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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