D. rerio Gene: vsig8b - ENSDARG00000013685 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013685
Namevsig8b
DescriptionV-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-145m1.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.53e3
  • 2.53e3
  • 4.37e3
  • 4.93e3
  • 6.48e3
  • 6.58e3
  • 6.58e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.91e3
  • 6.91e3
  • 6.97e3
  • 6.97e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 8.88e3
  • 8.88e3
91.46189
  • 91.46189
  • 85.21917
  • 83.32826
  • 78.11654
  • 77.76763
  • 77.76763
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 76.65821
  • 76.65821
  • 76.46123
  • 76.46045
  • 74.99322
  • 74.99322
  • 74.99153
  • 74.98902
  • 73.51758
  • 69.98817
  • 69.98817
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.06304
  • 90.06304
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.81e3
  • 3.81e3
87.13298
  • 87.13298
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.18e3
  • 4.18e3
85.88545
  • 85.88545
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.09e4
  • 1.09e4
  • 1.82e4
63.23323
  • 63.23323
  • 38.50377
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
60.93032
  • 60.93032
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.16e4
  • 1.16e4
  • 1.26e4
  • 1.29e4
  • 1.38e4
  • 1.76e4
60.81659
  • 60.81659
  • 57.57863
  • 56.42996
  • 53.25013
  • 40.62687
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
56.57479
  • 56.57479
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.01144
  • 51.01144
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
45.69483
  • 45.69483
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.61663
  • 44.61663
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.36212
  • 39.36212
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
33.62851
  • 33.62851
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX294006, CR749774
EnsemblENSDARG00000013685 (vsig8b)
Uniprot/SPTREMBLB0S5P6, B0S5P6_DANRE
ZFINZDB-GENE-081104-51 (vsig8b)

Do not show this banner again