D. rerio Gene: usp9 - ENSDARG00000013708 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013708
Nameusp9
Descriptionubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
2.50e3
  • 2.50e3
  • 2.75e3
  • 3.12e3
  • 3.16e3
  • 4.01e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.52e3
  • 2.52e3
  • 1.21e4
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:00072322 cell stage
  • ZFS:0000014Blastula:Sphere
2.53e3
  • 2.53e3
  • 4.37e3
  • 6.58e3
  • 6.73e3
  • 8.88e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.78e3
  • 2.78e3
  • 3.55e3
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.05e3
  • 3.05e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.37e3
  • 3.37e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.75e3
  • 3.75e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.82e3
  • 3.82e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.91e3
  • 4.91e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.87e3
  • 6.87e3
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.20e4
  • 1.20e4
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
1.32e4
  • 1.32e4
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
AEIR
  • AEIR
CL:0000223endodermal cell
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX545856, DQ086492
EnsemblENSDARG00000013708 (usp9)
Uniprot/SPTREMBLE7EXC7, E7EXC7_DANRE, Q4FE55, Q4FE55_DANRE
ZFINZDB-GENE-061019-1 (usp9)

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