D. rerio Gene: zgc:92113 - ENSDARG00000013749 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013749
Namezgc:92113
Descriptionzgc:92113 [Source:ZFIN;Acc:ZDB-GENE-040801-184]
OrganismDanio rerio (zebrafish)
Orthologs(s)12 orthologs
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
377
  • 377
98.74
  • 98.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
690
  • 690
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.84
  • 95.84
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.93
  • 93.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.32e3
  • 3.32e3
88.89
  • 88.89
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
3.62e3
  • 3.62e3
  • 7.10e3
  • 7.12e3
  • 1.03e4
  • 1.09e4
  • 1.23e4
  • 1.31e4
87.88
  • 87.88
  • 76.24
  • 76.16
  • 65.49
  • 63.55
  • 58.71
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.80e3
  • 3.80e3
  • 5.12e3
87.28
  • 87.28
  • 82.86
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.41e3
  • 4.41e3
  • 5.49e3
  • 6.31e3
85.23
  • 85.23
  • 81.60
  • 78.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
81.64
  • 81.64
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.51e3
  • 6.51e3
  • 1.22e4
78.20
  • 78.20
  • 59.04
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.56e3
  • 8.56e3
  • 1.72e4
71.35
  • 71.35
  • 42.44
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000104life cycle
  • ZFS:0000019Gastrula:Shield
8.88e3
  • 8.88e3
  • 9.99e3
  • 1.01e4
  • 1.09e4
  • 1.09e4
  • 1.12e4
  • 1.12e4
  • 1.15e4
  • 1.20e4
  • 1.21e4
  • 1.33e4
  • 1.38e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
  • 1.52e4
70.27
  • 70.27
  • 66.57
  • 66.16
  • 63.63
  • 63.63
  • 62.49
  • 62.49
  • 61.48
  • 59.98
  • 59.46
  • 55.48
  • 53.84
  • 50.46
  • 50.16
  • 49.92
  • 48.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.42
  • 60.42
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.31e4
  • 1.31e4
  • 1.52e4
55.99
  • 55.99
  • 48.95
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.15
  • 55.15
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.39e4
  • 1.39e4
  • 1.46e4
  • 1.64e4
53.58
  • 53.58
  • 50.95
  • 45.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.91
  • 52.91
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
  • 2.27e4
51.09
  • 51.09
  • 23.91
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.91
  • 48.91
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.95
  • 46.95
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.24
  • 43.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.32
  • 41.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.70
  • 39.70
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.80
  • 27.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000013749.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression
Opisthokonta12 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000013749.

Cross-references

EnsemblENSDARG00000013749 (zgc:92113)
ZFINZDB-GENE-040801-184 (zgc:92113)
EMBLBC075893, CU929146
Uniprot/SPTREMBLQ6DHS4, Q6DHS4_DANRE

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