D. rerio Gene: tnni2a.3 - ENSDARG00000013752 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013752
Nametnni2a.3
Descriptiontroponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]
OrganismDanio rerio (zebrafish)
Synonym(s)tropi-1c, zgc:92053
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
22.0
  • 22.0
99.93
  • 99.93
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
27.0
  • 27.0
99.91
  • 99.91
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
35.0
  • 35.0
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
74.7
  • 74.7
99.75
  • 99.75
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
338
  • 338
  • 1.69e4
  • 1.79e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
98.87
  • 98.87
  • 43.44
  • 40.18
  • 39.85
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
396
  • 396
  • 9.94e3
98.68
  • 98.68
  • 66.71
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
464
  • 464
98.45
  • 98.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
775
  • 775
97.41
  • 97.41
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.60e3
  • 3.60e3
87.94
  • 87.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.50
  • 81.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.54
  • 79.54
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.60e4
63.77
  • 63.77
  • 46.59
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
  • 1.94e4
  • 2.11e4
62.79
  • 62.79
  • 35.03
  • 29.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
1.16e4
  • 1.16e4
  • 1.18e4
  • 1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.31e4
61.09
  • 61.09
  • 60.50
  • 59.98
  • 59.98
  • 58.31
  • 58.31
  • 58.31
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000037Larval:Day 5
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.32e4
  • 1.32e4
  • 1.75e4
  • 1.85e4
55.74
  • 55.74
  • 41.48
  • 38.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.57
  • 47.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.25
  • 35.25
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.32
  • 27.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
22.10
  • 22.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi4 genesCompare expression
Eukaryota12 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000013752.

Cross-references

EnsemblENSDARG00000013752 (tnni2a.3)
ZFINZDB-GENE-040718-80 (tnni2a.3)
EMBLBC075871, CU302206
Uniprot/SPTREMBLQ6DHU6, Q6DHU6_DANRE

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