D. rerio Gene: RRBP1 (1 to many) - ENSDARG00000013763 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013763
NameRRBP1 (1 to many)
Descriptionzgc:171356 [Source:ZFIN;Acc:ZDB-GENE-080401-3]
OrganismDanio rerio (zebrafish)
Synonym(s)cb360, es/130, hes, sb:cb360, si:dkey-76k16.7, wu:fa66b07, wu:fb58g03, zgc:171356

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002415tail
  • UBERON:0000066fully formed stage
400
  • 400
98.65141
  • 98.65141
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
826
  • 826
  • 1.71e3
  • 1.96e3
  • 2.28e3
  • 2.61e3
  • 2.72e3
  • 2.95e3
  • 3.22e3
  • 4.27e3
  • 7.19e3
97.21157
  • 97.21157
  • 94.23430
  • 93.36677
  • 92.29582
  • 91.17503
  • 90.80469
  • 90.04385
  • 89.12528
  • 85.57126
  • 75.69604
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
967
  • 967
  • 8.53e3
96.73500
  • 96.73500
  • 71.17541
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
982
  • 982
96.68359
  • 96.68359
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
  • 1.38e3
  • 1.41e3
  • 1.63e3
  • 1.79e3
  • 1.95e3
  • 2.04e3
  • 2.16e3
  • 2.47e3
  • 2.76e3
  • 3.23e3
  • 3.30e3
  • 3.37e3
  • 3.51e3
  • 8.39e3
  • 1.34e4
  • 1.41e4
  • 1.43e4
96.48306
  • 96.48306
  • 95.34176
  • 95.24051
  • 94.49833
  • 93.94458
  • 93.42395
  • 93.11244
  • 92.71762
  • 91.64277
  • 90.68066
  • 89.07520
  • 88.84727
  • 88.62471
  • 88.14058
  • 71.65147
  • 54.82761
  • 52.22331
  • 51.55493
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.47097
  • 95.47097
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
  • 1.86e3
95.46409
  • 95.46409
  • 93.72285
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
94.09366
  • 94.09366
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.88e3
  • 1.88e3
93.63777
  • 93.63777
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.89e3
  • 1.89e3
93.63223
  • 93.63223
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.95e3
  • 1.95e3
93.41592
  • 93.41592
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
2.00e3
  • 2.00e3
  • 3.24e3
  • 3.58e3
  • 4.45e3
  • 4.59e3
93.25523
  • 93.25523
  • 89.06772
  • 87.91628
  • 84.95496
  • 84.48225
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
93.12862
  • 93.12862
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.19e3
  • 2.19e3
92.60974
  • 92.60974
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.22e3
  • 2.22e3
92.48951
  • 92.48951
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
2.69e3
  • 2.69e3
  • 3.09e3
  • 3.49e3
90.91643
  • 90.91643
  • 89.54658
  • 88.19857
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.57002
  • 90.57002
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
90.47877
  • 90.47877
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.82852
  • 89.82852
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.19e3
  • 3.19e3
89.21853
  • 89.21853
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.20024
  • 87.20024
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.94e3
  • 3.94e3
86.69507
  • 86.69507
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.57158
  • 86.57158
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.40e3
  • 4.40e3
  • 4.58e3
  • 8.61e3
85.13704
  • 85.13704
  • 84.53389
  • 70.89649
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
  • 8.64e3
84.04847
  • 84.04847
  • 70.81398
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
5.40e3
  • 5.40e3
  • 1.20e4
81.76852
  • 81.76852
  • 59.59010
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.68e3
  • 5.68e3
80.80479
  • 80.80479
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
  • 1.03e4
  • 1.04e4
73.23073
  • 73.23073
  • 65.04378
  • 64.88590
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
72.84856
  • 72.84856
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.33e4
  • 1.33e4
55.16372
  • 55.16372
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX005372
EnsemblENSDARG00000013763 (RRBP1 (1 to many))
HGNCHGNC:10448 (RRBP1 (1 to many))
Uniprot/SPTREMBLB8A4D7, B8A4D7_DANRE, E9QFY1, E9QFY1_DANRE, F1QP15, F1QP15_DANRE
ZFINZDB-GENE-080401-3 (zgc:171356)

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