D. rerio Gene: RRBP1 (1 to many) - ENSDARG00000013763 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013763
NameRRBP1 (1 to many)
Descriptionzgc:171356 [Source:ZFIN;Acc:ZDB-GENE-080401-3]
OrganismDanio rerio (zebrafish)
Synonym(s)cb360, es/130, hes, sb:cb360, si:dkey-76k16.7, wu:fa66b07, wu:fb58g03, zgc:171356
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002415tail
  • UBERON:0000066fully formed stage
400
  • 400
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
826
  • 826
  • 1.72e3
  • 1.98e3
  • 2.29e3
  • 2.74e3
  • 2.80e3
  • 2.95e3
  • 3.24e3
  • 4.30e3
  • 7.19e3
97.24
  • 97.24
  • 94.25
  • 93.38
  • 92.34
  • 90.82
  • 90.64
  • 90.12
  • 89.15
  • 85.60
  • 75.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
836
  • 836
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
967
  • 967
  • 8.53e3
96.77
  • 96.77
  • 71.44
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
  • 1.39e3
  • 1.42e3
  • 1.64e3
  • 1.81e3
  • 1.96e3
  • 2.05e3
  • 2.17e3
  • 2.49e3
  • 2.78e3
  • 3.26e3
  • 3.32e3
  • 3.39e3
  • 3.53e3
  • 8.45e3
  • 1.35e4
  • 1.43e4
  • 1.45e4
96.49
  • 96.49
  • 95.35
  • 95.24
  • 94.51
  • 93.96
  • 93.44
  • 93.13
  • 92.73
  • 91.66
  • 90.70
  • 89.10
  • 88.87
  • 88.65
  • 88.17
  • 71.71
  • 54.83
  • 52.23
  • 51.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.51
  • 95.51
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
  • 1.87e3
95.47
  • 95.47
  • 93.74
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.49e3
  • 1.49e3
95.01
  • 95.01
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.88e3
  • 1.88e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.89e3
  • 1.89e3
93.69
  • 93.69
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.95e3
  • 1.95e3
93.48
  • 93.48
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.45
  • 93.45
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
1.97e3
  • 1.97e3
  • 3.26e3
  • 3.60e3
  • 4.48e3
  • 4.63e3
  • 5.27e3
93.40
  • 93.40
  • 89.09
  • 87.94
  • 84.99
  • 84.52
  • 82.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.13
  • 93.13
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.20e3
  • 2.20e3
92.63
  • 92.63
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.24e3
  • 2.24e3
92.51
  • 92.51
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
2.34e3
  • 2.34e3
  • 5.26e3
  • 1.21e4
92.16
  • 92.16
  • 82.38
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
2.62e3
  • 2.62e3
  • 2.71e3
  • 3.12e3
  • 3.52e3
  • 3.68e3
91.24
  • 91.24
  • 90.94
  • 89.57
  • 88.22
  • 87.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.76e3
  • 2.76e3
90.75
  • 90.75
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.67
  • 90.67
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.66
  • 90.66
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
90.57
  • 90.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.92
  • 89.92
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.21e3
  • 3.21e3
89.24
  • 89.24
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.32
  • 87.32
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.94e3
  • 3.94e3
  • 4.43e3
  • 7.14e3
86.82
  • 86.82
  • 85.17
  • 76.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.97e3
  • 3.97e3
86.72
  • 86.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.70
  • 86.70
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.75e3
  • 4.75e3
  • 7.82e3
84.08
  • 84.08
  • 73.83
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.72e3
  • 5.72e3
80.85
  • 80.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.50
  • 76.50
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.98e3
  • 7.98e3
  • 8.40e3
  • 1.04e4
  • 1.05e4
73.29
  • 73.29
  • 71.89
  • 65.12
  • 64.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.91
  • 72.91
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000013763.

Cross-references

EnsemblENSDARG00000013763 (RRBP1 (1 to many))
HGNCHGNC:10448 (RRBP1 (1 to many))
ZFINZDB-GENE-080401-3 (zgc:171356)
EMBLBX005372
Uniprot/SPTREMBLB8A4D7, B8A4D7_DANRE, E9QFY1, E9QFY1_DANRE, F1QP15, F1QP15_DANRE

Do not show this banner again