D. rerio Gene: ctss2.2 - ENSDARG00000013771 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013771
Namectss2.2
Descriptioncathepsin S, ortholog 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-55]
OrganismDanio rerio (zebrafish)
Synonym(s)ctssb.2, wu:fj84d06, zgc:111950, zgc:112489
Orthologs(s)18 orthologs
Paralog(s)24 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
275
  • 275
99.08
  • 99.08
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
482
  • 482
98.39
  • 98.39
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
517
  • 517
98.27
  • 98.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
757
  • 757
97.47
  • 97.47
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
851
  • 851
  • 9.12e3
97.15
  • 97.15
  • 69.47
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.44
  • 96.44
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.30
  • 96.30
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.84e3
  • 1.84e3
  • 1.47e4
93.84
  • 93.84
  • 50.85
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.14
  • 93.14
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
92.32
  • 92.32
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.58e3
  • 2.58e3
91.35
  • 91.35
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.07e3
  • 3.07e3
  • 4.09e3
  • 9.08e3
  • 9.48e3
  • 9.75e3
  • 9.75e3
  • 9.84e3
  • 9.88e3
  • 1.01e4
  • 1.04e4
  • 1.05e4
  • 1.06e4
  • 1.07e4
  • 1.29e4
  • 1.50e4
89.73
  • 89.73
  • 86.30
  • 69.60
  • 68.24
  • 67.37
  • 67.36
  • 67.04
  • 66.93
  • 66.30
  • 65.25
  • 64.97
  • 64.34
  • 64.14
  • 56.79
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.58e3
  • 3.58e3
  • 1.23e4
88.03
  • 88.03
  • 58.68
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.60
  • 85.60
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
84.81
  • 84.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
81.44
  • 81.44
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.17e3
  • 6.17e3
79.35
  • 79.35
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
6.78e3
  • 6.78e3
77.30
  • 77.30
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.29
  • 77.29
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.43e3
  • 7.43e3
  • 1.17e4
75.11
  • 75.11
  • 60.69
AEIR
  • AEIR
  • AEIR
CL:0000235macrophage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.47e3
  • 8.96e3
  • 8.96e3
  • 9.96e3
  • 1.07e4
  • 1.07e4
  • 1.19e4
75.00
  • 75.00
  • 75.00
  • 70.00
  • 70.00
  • 66.66
  • 64.28
  • 64.28
  • 59.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
7.97e3
  • 7.97e3
  • 7.97e3
  • 7.97e3
  • 8.53e3
  • 8.53e3
  • 8.96e3
  • 1.03e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
  • 1.14e4
  • 1.15e4
  • 1.17e4
  • 1.17e4
  • 1.17e4
  • 1.17e4
73.32
  • 73.32
  • 73.32
  • 73.32
  • 71.43
  • 71.43
  • 69.99
  • 65.61
  • 64.69
  • 64.69
  • 64.69
  • 64.69
  • 61.75
  • 61.53
  • 60.70
  • 60.70
  • 60.70
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.55e3
  • 8.55e3
  • 1.02e4
  • 1.07e4
71.39
  • 71.39
  • 65.87
  • 64.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.09e3
  • 9.09e3
  • 9.40e3
  • 1.06e4
  • 1.13e4
  • 1.19e4
  • 1.39e4
69.57
  • 69.57
  • 68.53
  • 64.53
  • 62.02
  • 60.29
  • 53.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
9.56e3
  • 9.56e3
  • 9.57e3
  • 1.07e4
  • 1.09e4
  • 1.12e4
  • 1.25e4
  • 1.44e4
  • 1.53e4
  • 1.55e4
  • 1.58e4
67.98
  • 67.98
  • 67.95
  • 64.14
  • 63.56
  • 62.45
  • 58.01
  • 51.65
  • 48.69
  • 48.20
  • 47.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.04e4
  • 1.04e4
  • 1.14e4
65.32
  • 65.32
  • 61.75
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.19e4
  • 1.19e4
  • 1.58e4
  • 1.68e4
60.09
  • 60.09
  • 47.06
  • 43.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
  • 1.24e4
  • 1.28e4
  • 1.31e4
  • 1.39e4
  • 1.39e4
  • 1.40e4
58.32
  • 58.32
  • 58.32
  • 57.14
  • 56.24
  • 53.55
  • 53.55
  • 53.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.30e4
  • 1.30e4
56.57
  • 56.57
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.42
  • 49.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Opisthokonta18 genesCompare expression
Eukaryota24 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000013771.

Cross-references

EnsemblENSDARG00000013771 (ctss2.2)
ZFINZDB-GENE-050626-55 (ctss2.2)
EMBLBX248517
Uniprot/SPTREMBLA2BF64, A2BF64_DANRE

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